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Landmark or Region: Examples: PvScaf3, PvScaf33, Pv.00001, Pv.00002, Glycoside, hydrolase.	Annotate Restriction Sites Download Decorated FASTA File Download Sequence File Download Track Data
Data Source P. vanderplanki [version 0.91]	Scroll/Zoom:     Show 943 bp Show 200 bp Show 100 bp     Flip

The following 147 regions match your request.

 

PvScaf33669

 

PvScaf33857

 

PvScaf33449

 

PvScaf3332

 

PvScaf33004

 

PvScaf3375

 

PvScaf33423

 

PvScaf33025

 

PvScaf33859

 

PvScaf33477

 

PvScaf33931

 

PvScaf33323

 

PvScaf3328

 

PvScaf33040

 

PvScaf33805

 

PvScaf33832

 

PvScaf33424

 

PvScaf3393

 

PvScaf33242

 

PvScaf33033

 

PvScaf3382

 

PvScaf33564

 

PvScaf33432

 

PvScaf33380

 

PvScaf33879

 

PvScaf332

 

PvScaf33715

 

PvScaf33295

 

PvScaf33138

 

PvScaf3374

 

PvScaf33677

 

PvScaf33823

 

PvScaf33272

 

PvScaf33646

 

PvScaf33466

 

PvScaf3362

 

PvScaf33847

 

PvScaf33306

 

PvScaf3396

 

PvScaf331

 

PvScaf33991

 

PvScaf33498

 

PvScaf33223

 

PvScaf336

 

PvScaf3361

 

PvScaf33462

 

PvScaf33365

 

PvScaf33279

 

PvScaf338

 

PvScaf33362

 

PvScaf33717

 

PvScaf33448

 

PvScaf33985

 

PvScaf3306

 

PvScaf3395

 

PvScaf3348

 

PvScaf33842

 

PvScaf33519

 

PvScaf33313

 

PvScaf33855

 

PvScaf33533

 

PvScaf3309

 

PvScaf33137

 

PvScaf3388

 

PvScaf33061

 

PvScaf3341

 

PvScaf3399

 

PvScaf33093

 

PvScaf3318

 

PvScaf33728

 

PvScaf33384

 

PvScaf33413

 

PvScaf33560

 

PvScaf3368

 

PvScaf33708

 

PvScaf33538

 

PvScaf3335

 

PvScaf3308

 

PvScaf33827

 

PvScaf3389

 

PvScaf33688

 

PvScaf33052

 

PvScaf33363

 

PvScaf3372

 

PvScaf33290

 

PvScaf3319

 

PvScaf33826

 

PvScaf33523

 

PvScaf33391

 

PvScaf3345

 

PvScaf33851

 

PvScaf3398

 

PvScaf33201

 

PvScaf33629

 

PvScaf33885

 

PvScaf33095

 

PvScaf3344

 

PvScaf339

 

PvScaf33671

 

PvScaf33942

 

PvScaf3320

 

PvScaf33756

 

PvScaf3386

 

PvScaf33081

 

PvScaf33724

 

PvScaf33393

 

PvScaf33326

 

PvScaf33800

 

PvScaf33502

 

PvScaf33894

 

PvScaf3315

 

PvScaf33705

 

PvScaf33702

 

PvScaf3347

 

PvScaf33853

 

PvScaf33084

 

PvScaf3310

 

PvScaf33046

 

PvScaf33390

 

PvScaf3363

 

PvScaf33097

 

PvScaf3302

 

PvScaf33291

 

PvScaf3358

 

PvScaf33509

 

PvScaf33047

 

PvScaf33425

 

PvScaf33401

 

PvScaf3380

 

PvScaf33798

 

PvScaf3383

 

PvScaf3392

 

PvScaf33568

 

PvScaf33720

 

PvScaf33792

 

PvScaf33122

 

PvScaf33616

 

PvScaf33002

 

PvScaf33625

 

PvScaf33386

 

PvScaf33545

 

PvScaf3329

 

PvScaf3333

 

PvScaf33243

 

PvScaf3330

 

PvScaf3351

 

PvScaf33745

Name	Type	Description	Position	Match Score
PvScaf33669	supercontig		PvScaf33669:1..1111	n/a
PvScaf33857	supercontig		PvScaf33857:1..794	n/a
PvScaf33449	supercontig		PvScaf33449:1..1357	n/a
PvScaf3332	supercontig		PvScaf3332:1..1024	n/a
PvScaf33004	supercontig		PvScaf33004:1..1063	n/a
PvScaf3375	supercontig		PvScaf3375:1..54490	n/a
PvScaf33423	supercontig		PvScaf33423:1..756	n/a
PvScaf33025	supercontig		PvScaf33025:1..2313	n/a
PvScaf33859	supercontig		PvScaf33859:1..1224	n/a
PvScaf33477	supercontig		PvScaf33477:1..861	n/a
PvScaf33931	supercontig		PvScaf33931:1..592	n/a
PvScaf33323	supercontig		PvScaf33323:1..741	n/a
PvScaf3328	supercontig		PvScaf3328:1..606	n/a
PvScaf33040	supercontig		PvScaf33040:1..1740	n/a
PvScaf33805	supercontig		PvScaf33805:1..919	n/a
PvScaf33832	supercontig		PvScaf33832:1..571	n/a
PvScaf33424	supercontig		PvScaf33424:1..366	n/a
PvScaf3393	supercontig		PvScaf3393:1..1281	n/a
PvScaf33242	supercontig		PvScaf33242:1..1603	n/a
PvScaf33033	supercontig		PvScaf33033:1..548	n/a
PvScaf3382	supercontig		PvScaf3382:1..1926	n/a
PvScaf33564	supercontig		PvScaf33564:1..1287	n/a
PvScaf33432	supercontig		PvScaf33432:1..2847	n/a
PvScaf33380	supercontig		PvScaf33380:1..1346	n/a
PvScaf33879	supercontig		PvScaf33879:1..2822	n/a
PvScaf332	supercontig		PvScaf332:1..77286	n/a
PvScaf33715	supercontig		PvScaf33715:1..998	n/a
PvScaf33295	supercontig		PvScaf33295:1..624	n/a
PvScaf33138	supercontig		PvScaf33138:1..593	n/a
PvScaf3374	supercontig		PvScaf3374:1..4973	n/a
PvScaf33677	supercontig		PvScaf33677:1..898	n/a
PvScaf33823	supercontig		PvScaf33823:1..745	n/a
PvScaf33272	supercontig		PvScaf33272:1..558	n/a
PvScaf33646	supercontig		PvScaf33646:1..1947	n/a
PvScaf33466	supercontig		PvScaf33466:1..3439	n/a
PvScaf3362	supercontig		PvScaf3362:1..8246	n/a
PvScaf33847	supercontig		PvScaf33847:1..1857	n/a
PvScaf33306	supercontig		PvScaf33306:1..4730	n/a
PvScaf3396	supercontig		PvScaf3396:1..4985	n/a
PvScaf331	supercontig		PvScaf331:1..158636	n/a
PvScaf33991	supercontig		PvScaf33991:1..1850	n/a
PvScaf33498	supercontig		PvScaf33498:1..2507	n/a
PvScaf33223	supercontig		PvScaf33223:1..561	n/a
PvScaf336	supercontig		PvScaf336:1..1452291	n/a
PvScaf3361	supercontig		PvScaf3361:1..3354	n/a
PvScaf33462	supercontig		PvScaf33462:1..548	n/a
PvScaf33365	supercontig		PvScaf33365:1..739	n/a
PvScaf33279	supercontig		PvScaf33279:1..2049	n/a
PvScaf338	supercontig		PvScaf338:1..172360	n/a
PvScaf33362	supercontig		PvScaf33362:1..1254	n/a
PvScaf33717	supercontig		PvScaf33717:1..2289	n/a
PvScaf33448	supercontig		PvScaf33448:1..563	n/a
PvScaf33985	supercontig		PvScaf33985:1..1402	n/a
PvScaf3306	supercontig		PvScaf3306:1..4716	n/a
PvScaf3395	supercontig		PvScaf3395:1..2069	n/a
PvScaf3348	supercontig		PvScaf3348:1..1034	n/a
PvScaf33842	supercontig		PvScaf33842:1..1404	n/a
PvScaf33519	supercontig		PvScaf33519:1..739	n/a
PvScaf33313	supercontig		PvScaf33313:1..2318	n/a
PvScaf33855	supercontig		PvScaf33855:1..3684	n/a
PvScaf33533	supercontig		PvScaf33533:1..509	n/a
PvScaf3309	supercontig		PvScaf3309:1..63176	n/a
PvScaf33137	supercontig		PvScaf33137:1..1086	n/a
PvScaf3388	supercontig		PvScaf3388:1..3928	n/a
PvScaf33061	supercontig		PvScaf33061:1..1046	n/a
PvScaf3341	supercontig		PvScaf3341:1..2434	n/a
PvScaf3399	supercontig		PvScaf3399:1..6161	n/a
PvScaf33093	supercontig		PvScaf33093:1..5900	n/a
PvScaf3318	supercontig		PvScaf3318:1..2680	n/a
PvScaf33728	supercontig		PvScaf33728:1..821	n/a
PvScaf33384	supercontig		PvScaf33384:1..700	n/a
PvScaf33413	supercontig		PvScaf33413:1..544	n/a
PvScaf33560	supercontig		PvScaf33560:1..554	n/a
PvScaf3368	supercontig		PvScaf3368:1..3611	n/a
PvScaf33708	supercontig		PvScaf33708:1..1837	n/a
PvScaf33538	supercontig		PvScaf33538:1..507	n/a
PvScaf3335	supercontig		PvScaf3335:1..2214	n/a
PvScaf3308	supercontig		PvScaf3308:1..8973	n/a
PvScaf33827	supercontig		PvScaf33827:1..1320	n/a
PvScaf3389	supercontig		PvScaf3389:1..4498	n/a
PvScaf33688	supercontig		PvScaf33688:1..570	n/a
PvScaf33052	supercontig		PvScaf33052:1..532	n/a
PvScaf33363	supercontig		PvScaf33363:1..2139	n/a
PvScaf3372	supercontig		PvScaf3372:1..1172	n/a
PvScaf33290	supercontig		PvScaf33290:1..2781	n/a
PvScaf3319	supercontig		PvScaf3319:1..5113	n/a
PvScaf33826	supercontig		PvScaf33826:1..522	n/a
PvScaf33523	supercontig		PvScaf33523:1..1682	n/a
PvScaf33391	supercontig		PvScaf33391:1..842	n/a
PvScaf3345	supercontig		PvScaf3345:1..10513	n/a
PvScaf33851	supercontig		PvScaf33851:1..584	n/a
PvScaf3398	supercontig		PvScaf3398:1..4210	n/a
PvScaf33201	supercontig		PvScaf33201:1..1519	n/a
PvScaf33629	supercontig		PvScaf33629:1..714	n/a
PvScaf33885	supercontig		PvScaf33885:1..5976	n/a
PvScaf33095	supercontig		PvScaf33095:1..4178	n/a
PvScaf3344	supercontig		PvScaf3344:1..1199	n/a
PvScaf339	supercontig		PvScaf339:1..15898	n/a
PvScaf33671	supercontig		PvScaf33671:1..605	n/a
PvScaf33942	supercontig		PvScaf33942:1..524	n/a
PvScaf3320	supercontig		PvScaf3320:1..2596	n/a
PvScaf33756	supercontig		PvScaf33756:1..2342	n/a
PvScaf3386	supercontig		PvScaf3386:1..6447	n/a
PvScaf33081	supercontig		PvScaf33081:1..1419	n/a
PvScaf33724	supercontig		PvScaf33724:1..758	n/a
PvScaf33393	supercontig		PvScaf33393:1..1733	n/a
PvScaf33326	supercontig		PvScaf33326:1..2127	n/a
PvScaf33800	supercontig		PvScaf33800:1..671	n/a
PvScaf33502	supercontig		PvScaf33502:1..762	n/a
PvScaf33894	supercontig		PvScaf33894:1..2089	n/a
PvScaf3315	supercontig		PvScaf3315:1..80973	n/a
PvScaf33705	supercontig		PvScaf33705:1..1506	n/a
PvScaf33702	supercontig		PvScaf33702:1..1641	n/a
PvScaf3347	supercontig		PvScaf3347:1..501	n/a
PvScaf33853	supercontig		PvScaf33853:1..667	n/a
PvScaf33084	supercontig		PvScaf33084:1..4366	n/a
PvScaf3310	supercontig		PvScaf3310:1..1596	n/a
PvScaf33046	supercontig		PvScaf33046:1..4982	n/a
PvScaf33390	supercontig		PvScaf33390:1..3454	n/a
PvScaf3363	supercontig		PvScaf3363:1..669	n/a
PvScaf33097	supercontig		PvScaf33097:1..1157	n/a
PvScaf3302	supercontig		PvScaf3302:1..113993	n/a
PvScaf33291	supercontig		PvScaf33291:1..2027	n/a
PvScaf3358	supercontig		PvScaf3358:1..3648	n/a
PvScaf33509	supercontig		PvScaf33509:1..1903	n/a
PvScaf33047	supercontig		PvScaf33047:1..2578	n/a
PvScaf33425	supercontig		PvScaf33425:1..816	n/a
PvScaf33401	supercontig		PvScaf33401:1..630	n/a
PvScaf3380	supercontig		PvScaf3380:1..2210	n/a
PvScaf33798	supercontig		PvScaf33798:1..571	n/a
PvScaf3383	supercontig		PvScaf3383:1..812	n/a
PvScaf3392	supercontig		PvScaf3392:1..2098	n/a
PvScaf33568	supercontig		PvScaf33568:1..1190	n/a
PvScaf33720	supercontig		PvScaf33720:1..3144	n/a
PvScaf33792	supercontig		PvScaf33792:1..2642	n/a
PvScaf33122	supercontig		PvScaf33122:1..508	n/a
PvScaf33616	supercontig		PvScaf33616:1..799	n/a
PvScaf33002	supercontig		PvScaf33002:1..943	n/a
PvScaf33625	supercontig		PvScaf33625:1..644	n/a
PvScaf33386	supercontig		PvScaf33386:1..659	n/a
PvScaf33545	supercontig		PvScaf33545:1..3750	n/a
PvScaf3329	supercontig		PvScaf3329:1..2670	n/a
PvScaf3333	supercontig		PvScaf3333:1..1078	n/a
PvScaf33243	supercontig		PvScaf33243:1..2821	n/a
PvScaf3330	supercontig		PvScaf3330:1..531	n/a
PvScaf3351	supercontig		PvScaf3351:1..586	n/a
PvScaf33745	supercontig		PvScaf33745:1..5136	n/a

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 Tracks

 Tracks

 

 DNA

 DNA

 All on All off 

6-frame translation

DNA/GC Content

 Gene model (AUGUSTUS)

 Gene model (AUGUSTUS)

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Gene (AUGUSTUS)

Gene model (AUGUSTUS: transcript)

 General

 General

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mRNAs in public DB

Pv Sanger ESTs aligned by GMAP

PvFosmid-end

 Polulation

 Polulation

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Short reads coverage [Malawi population]

 RNA-seq based transcript (Tophat + Cufflinks)

 RNA-seq based transcript (Tophat + Cufflinks)

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RNA-seq based transcript [adult stage (female)]	RNA-seq based transcript [larvae stage]	RNA-seq based transcript [PvD48: desiccation 48h]
RNA-seq based transcript [adult stage (male)]	RNA-seq based transcript [pupae stage]	RNA-seq based transcript [PvR24: desiccation 24h]
RNA-seq based transcript [adult stage]	RNA-seq based transcript [PvD0: desiccation 0h]	RNA-seq based transcript [PvR3: desiccation 3h]
RNA-seq based transcript [egg stage]	RNA-seq based transcript [PvD24: desiccation 24h]

 RNA-seq based transcript (candidate for ncRNA; no ORF)

 RNA-seq based transcript (candidate for ncRNA; no ORF)

 All on All off 

RNA-seq based transcript (no ORF) [adult stage]	RNA-seq based transcript (no ORF) [pupae stage]	RNA-seq based transcript (no ORF) [PvD48]
RNA-seq based transcript (no ORF) [egg stage]	RNA-seq based transcript (no ORF) [PvD0]	RNA-seq based transcript (no ORF) [PvR24]
RNA-seq based transcript (no ORF) [larvae stage]	RNA-seq based transcript (no ORF) [PvD24]	RNA-seq based transcript (no ORF) [PvR3]

 RNA-seq reads coverage

 RNA-seq reads coverage

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RNA-seq reads coverage [PvAdult: adult]	RNA-seq reads coverage [PvD48: desiccation 48h]	RNA-seq reads coverage [PvPupae: pupae]
RNA-seq reads coverage [PvD0: desiccation 0h]	RNA-seq reads coverage [PvEgg: egg]	RNA-seq reads coverage [PvR24: rehydration 24h]
RNA-seq reads coverage [PvD24: desiccation 24h]	RNA-seq reads coverage [PvLarvae: larvae]	RNA-seq reads coverage [PvR3: rehydration 3h]

 Repeat sequence

 Repeat sequence

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Repeat sequence [RepBase]

 Analysis

 Analysis

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Restriction Sites

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Custom Tracks

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