MidgeBase gene description page [Pv.00443]

Outline

Link to gbrowse

Gene ID Pv.00443
Type Protein coding gene
Scaffold PvScaf121
Start 618702
End 619124
Direction -

Sequence

Transcript: 420 (bp)

 ATGAGAATGTGTGGAAGAAAAAATTTTTTTGGTCATTGTCATCGTAGACATACAAGACATCATTTTGAGCGTCAAGAAAGACCAAGATGCCAAAGCGAGCCAATTCAACCACCTCGCTATTCCTTCGCTGAGCGACAAGAATCATCTAGTCGAGATCATGGAGAAGGTCCATCACACGATTGTGGAACAATGACAATGAAACAGCATTGTGGTCATCAACAACTACGGCAACAAAATTCGGGCTGCATACATCGTCAACTAAATGAAAATCGTTTTAGTTGCATGCGAAGATTTAGAGAAAACAGTCCACGCTGTCACAGACATCATGCATCTAAAGGACCTCATGAACATCACCATCATAGTTCAAGAGGAACTCATCATCATCATAGAGTAGGCAGAAAACATCATTGCCATCATAAT 

Protein: 140 (aa)

 MRMCGRKNFFGHCHRRHTRHHFERQERPRCQSEPIQPPRYSFAERQESSSRDHGEGPSHDCGTMTMKQHCGHQQLRQQNSGCIHRQLNENRFSCMRRFRENSPRCHRHHASKGPHEHHHHSSRGTHHHHRVGRKHHCHHN 
Type Start End Length
CDS 618705 619124 420

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr NA No hit found NA
Pfam PF13178.1 Protein of unknown function (DUF4005) 8.3
Pfam PF06547.7 Protein of unknown function (DUF1117) 0.15

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID

Orthologous genes

Species Gene ID