MidgeBase gene description page [Pn.17210]
Outline
| Gene ID | Pn.17210 |
| Type | Protein coding gene |
| Scaffold | PnScaf51100 |
| Start | 129 |
| End | 1021 |
| Direction | + |
Sequence
Transcript: 840 (bp)
ATGGCGATGCTCGCGCGCTTCGCGTCGTCCTACATCGGAGCGGAGCTGCTGCTCGAGAATCGCGTCATCGGCGTGCTGTCGCAGATGAAGGTGTTCGACCTCCATCCGGACTTTCAAATCAGCAGCATGATGGACACGAGCGAGAACTCCTTCATTCCGTCCATCAGCCATCGATACCAGCAGATTCTGTTTCCGGCGCTGAGTCTGTGCGACGTCATCCTGATCACCCTCGGACCCGAGAATCAGTCGGTCATCACGCAAATCACGCACTTTTTGCTCTCGCACTCGGACATCGTGGAGATTGTGTTGCGTGCCGGAACGCCTTCGATGAACTTGGGTCTGCTGAGGGAGCTGTCGGGCCTGACGGGACTGATTGCGCGTGCATCGAACCAAAGTATCAGCGACCTGATGGATCCGAGCGGAAACCACGATATTGGCGCGCATCTGTATCGCCTGCAGAAGCTGATGATGGCGCTCTTTCCACGCTTCACACTCACCGCTCTCAATCTGAAAGAGGCACAGAAGTCGTTCGGAGGCATGCAAGCGGAAAGCGACGAGAAGGAGAAGCAGAAGGCGGAAAGAATATTGACTTTCCTGCAGGTGGCATCGAATATTTCGCTCTATGCGCGAAACTGCATCGCCAATCACTCGGTCGACCATCGAACGACAAAGGTTCTGTTCTCGATCAACAACGACACGCTTTCGAATGGACAGGAGTCGGCAGCGACTACGTCGTCGCCCGACTTGAGCGTCGTCGTTACGCAACTGAAGAACTGCGTGGAGTTTTACAATCGCGAGAAGATGACTTACGACACTCTTGTGCGACAGAAAACTCTTGGC
Protein: 280 (aa)
MAMLARFASSYIGAELLLENRVIGVLSQMKVFDLHPDFQISSMMDTSENSFIPSISHRYQQILFPALSLCDVILITLGPENQSVITQITHFLLSHSDIVEIVLRAGTPSMNLGLLRELSGLTGLIARASNQSISDLMDPSGNHDIGAHLYRLQKLMMALFPRFTLTALNLKEAQKSFGGMQAESDEKEKQKAERILTFLQVASNISLYARNCIANHSVDHRTTKVLFSINNDTLSNGQESAATTSSPDLSVVVTQLKNCVEFYNREKMTYDTLVRQKTLG
| Type | Start | End | Length |
| CDS |
129 |
960 |
832 |
| CDS |
1011 |
1018 |
8 |
| intron |
961 |
1010 |
50 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648879 |
hypothetical protein AaeL_AAEL014503 [Aedes aegypti] gb|EAT33237.1| conserved hypothetical protein [Aedes aegypti] |
3e-88 |
| InterPro |
IPR021827 |
Protein of unknown function DUF3414 |
|
| Pfam |
PF11894.3 |
Protein of unknown function (DUF3414) |
6.2e-33 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL014503 |
| A. aegypti |
AAEL014502 |
| A. gambiae |
AGAP008090 |
| D. melanogaster |
FBgn0031078 |
| P. vanderplanki |
Pv.12621 |
| P. humanus |
PHUM561100-PA |
| N. vitripennis |
NV18986-PA |
| S. invicta |
SI2.2.0_14915 |
| B. mori |
BGIBMGA007622-TA |
| D. plexippus |
DPOGS215310PA |
| T. castaneum |
TC003479 |
| H. sapiens |
ENSP00000285968 |
| C. quinquefasciatus |
CPIJ003755 |
| A. aegypti |
AAEL010526 |
| M. musculus |
ENSMUSG00000038759 |
| H. melpomene |
HMEL008282-PA |
| A. mellifera |
GB18099-PA |