MidgeBase gene description page [Pn.17202]
Outline
| Gene ID | Pn.17202 |
| Type | Protein coding gene |
| Scaffold | PnScaf50757 |
| Start | 117 |
| End | 426 |
| Direction | + |
Sequence
Transcript: 243 (bp)
ATGTCGCTCATCGATCAGAGTTTGATAACCGTGAAAACAGCTCGCGAGGAAGGCTACGACATTCAGCTGCGCTTCCGCACGACGCTTCCGAACGGAGTACTCGCCTTCGGTACCGCCGATAGCTCCAACAGCTACATTCTCGAGCTGGTCAATGGACGACTGAACTTGCACTCGTCGCTGCTAAACAAGTGGGAGGGCGTCTTCATAGGCTCACAACTCAACGACAGCAAACGATCTACCCGA
Protein: 81 (aa)
MSLIDQSLITVKTAREEGYDIQLRFRTTLPNGVLAFGTADSSNSYILELVNGRLNLHSSLLNKWEGVFIGSQLNDSKRSTR
| Type | Start | End | Length |
| CDS |
117 |
346 |
230 |
| CDS |
411 |
423 |
13 |
| intron |
347 |
410 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002072428 |
GK22329 [Drosophila willistoni] gb|EDW83414.1| GK22329 [Drosophila willistoni] |
4e-28 |
| InterPro |
IPR008985 |
Concanavalin A-like lectin/glucanase |
|
| InterPro |
IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
|
| InterPro |
IPR001791 |
Laminin G domain |
|
| Pfam |
PF02210.19 |
Laminin G domain |
1.8e-05 |
| Pfam |
PF00054.18 |
Laminin G domain |
2.2e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes