MidgeBase gene description page [Pn.17097]
Outline
| Gene ID | Pn.17097 |
| Type | Protein coding gene |
| Scaffold | PnScaf48722 |
| Start | 85 |
| End | 692 |
| Direction | + |
Sequence
Transcript: 546 (bp)
ATGTACGACGATGGCCCGCTGCCGTTTACGACGCGTCACTACTTGGCCATCATAGCGGCCGCTCGCAACAAGTGCAACTACCTGGTGAGCCTCCACGAGAAGGAGTTCCTGGCGGAGGGCGGCGACACGAAGTGGCTCAACGGACTCGAATTCATTCCACAGAAGCTGCGTGCCATCTACGACATCAACAAAATCCTCGCGCATCGTCCGTGGCTGTTGACCAAAGAGCACATTGAGCGCCTGACAAAGGGCACCAACAGCTGGTCTCTCGCCGAAGTCGTGCACGCAATCGTCATTCTAGCTCACTTTCATTCACTCTCATCAATCGCCGACGTCAGTCGAGCCGGAGCCGGAAATCAAGCCGAGCACCACGCCGCCCTTCATCCAGCGTCTCAAGCTCGAGCAGCAACGCATGCACCAGATGATGAAGGAGCAAGAGGAACAAAGCAAGAAGATTCTTCAGCAGAACAACTCACAGCTTCAGCAACAGCAGCAACAGCCGACGACGCTCCAGCAGCTGCAGCAGCAATCGAATGGCACCGGCAG
Protein: 182 (aa)
MYDDGPLPFTTRHYLAIIAAARNKCNYLVSLHEKEFLAEGGDTKWLNGLEFIPQKLRAIYDINKILAHRPWLLTKEHIERLTKGTNSWSLAEVVHAIVILAHFHSLSSIADVSRAGAGNQAEHHAALHPASQARAATHAPDDEGARGTKQEDSSAEQLTASATAATADDAPAAAAAIEWHRQ
| Type | Start | End | Length |
| CDS |
85 |
407 |
323 |
| CDS |
467 |
689 |
223 |
| intron |
408 |
466 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001861045 |
P53 regulated pa26 nuclear protein sestrin [Culex quinquefasciatus] gb|EDS35391.1| P53 regulated pa26 nuclear protein sestrin [Culex quinquefasciatus] |
1e-45 |
| InterPro |
IPR006730 |
PA26 p53-induced protein (sestrin) |
|
| Gene Ontology(BP) |
GO:0007050 |
cell cycle arrest |
|
| Gene Ontology(CC) |
GO:0005634 |
nucleus |
|
| Pfam |
PF06679.7 |
Protein of unknown function (DUF1180) |
0.2 |
| Pfam |
PF04636.8 |
PA26 p53-induced protein (sestrin) |
1.8e-57 |
| Pfam |
PF02627.15 |
Carboxymuconolactone decarboxylase family |
0.00058 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000038332 |
| S. invicta |
SI2.2.0_08098 |
| M. musculus |
ENSMUSG00000032009 |
| A. mellifera |
GB12961-PA |
| H. sapiens |
ENSP00000278499 |
| T. castaneum |
TC003553 |
| D. melanogaster |
FBgn0034897 |
| C. quinquefasciatus |
CPIJ010665 |
| H. sapiens |
ENSP00000253063 |
| P. humanus |
PHUM285310-PA |
| N. vitripennis |
NV50217-PA |
| H. sapiens |
ENSP00000349061 |
| H. sapiens |
ENSP00000393762 |
| H. sapiens |
ENSP00000407008 |
| M. musculus |
ENSMUSG00000028893 |
| A. gambiae |
AGAP007169 |
| H. sapiens |
ENSP00000306734 |
| H. sapiens |
ENSP00000376926 |
| A. aegypti |
AAEL002487 |
| H. sapiens |
ENSP00000441927 |
| P. vanderplanki |
Pv.03618 |