MidgeBase gene description page [Pn.17068]
Outline
| Gene ID | Pn.17068 |
| Type | Protein coding gene |
| Scaffold | PnScaf47830 |
| Start | 312 |
| End | 1561 |
| Direction | + |
Sequence
Transcript: 1077 (bp)
ATGTTGCAAGTCTGGCCAGTACGTCAACCACGTCCAGTCACCGAAAAAATGCCAGCCAACCATCCTCTATTGACCGGACAGCGTGTCTTGGATTCGCTCTTCCCCTGCGTACAAGGAGGAACAACTGCCATTCCGGGAGCTTTCGGTTGCGGCAAGACTGTCATTTCACAGGCTCTGTCCAAGTACTCAAACTCGGATGTCATCATCTACGTCGGTTGCGGCGAGCGTGGTAACGAAATGTCAGAGGTACTTCGCGATTTCCCCGAGTTGTCAGTCGAAATTGACGGTGTCACCGAGTCGATCATGAAGCGTACTGCTCTGGTCGCTAACACATCCAACATGCCTGTCGCTGCTCGTGAGGCTTCCATTTACACCGGTATCACACTCTCGGAGTATTTCCGTGACATGGGCTACAACGTCTCCATGATGGCTGACTCGACATCGCGTTGGGCTGAGGCTCTTCGTGAGATTTCTGGTCGTTTGGCTGAGATGCCTGCCGATTCCGGTTACCCTGCTTACCTGGGAGCCCGTCTTGCCTCCTTCTACGAACGTGCTGGTCGCGTCAAGTGCTTGGGTAATCCAGAGCGTGAGGGCTCGGTGTCGATTGTCGGTGCCGTATCGCCACCCGGTGGAGATTTCTCAGATCCCGTCACCTCAGCCACCTTGGGTATCGTTCAAGTCTTCTGGGGCTTGGACAAGAAGCTCGCTCAGCGCAAACACTTCCCATCTATCAACTGGCTTATTTCCTACAGTAAATACATGCGCGCACTCGACGACTTCTATGATAAGAACTTCCCCGAGTTTGTCCCATTGCGTACCAAGGTGAAGGAGATTCTTCAAGAGGAAGAGGACTTGTCAGAAATTGTGCAACTCGTCGGTAAGGCATCTCTCGCTGAAACCGATAAGATCACATTGGAGGTCGCGAAGCTGCTCAAAGACGATTTCTTGCAACAAAATTCCTACTCGTCATACGATCGCTTCTGTCCATTCTACAAAACTGTCGGCATGCTTAAAAACATGATTGCCTTCTACGATATGGCGCTTCAAGGACCCCGTCAAGGATGGCGAGGCAAAGAT
Protein: 359 (aa)
MLQVWPVRQPRPVTEKMPANHPLLTGQRVLDSLFPCVQGGTTAIPGAFGCGKTVISQALSKYSNSDVIIYVGCGERGNEMSEVLRDFPELSVEIDGVTESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNMIAFYDMALQGPRQGWRGKD
| Type | Start | End | Length |
| CDS |
312 |
1063 |
752 |
| CDS |
1133 |
1422 |
290 |
| CDS |
1524 |
1558 |
35 |
| intron |
1064 |
1132 |
69 |
| intron |
1423 |
1523 |
101 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002003772 |
GI18088 [Drosophila mojavensis] gb|EDW13214.1| GI18088 [Drosophila mojavensis] |
0.0 |
| InterPro |
IPR020003 |
ATPase, alpha/beta subunit, nucleotide-binding domain, active site |
|
| InterPro |
IPR000793 |
ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal |
|
| InterPro |
IPR000194 |
ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
|
| InterPro |
IPR024034 |
ATPase, F1 complex beta subunit/V1 complex, C-terminal |
|
| Gene Ontology(BP) |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
| Gene Ontology(CC) |
GO:0033178 |
proton-transporting two-sector ATPase complex, catalytic domain |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0016820 |
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances |
|
| Pfam |
PF13173.1 |
AAA domain |
0.033 |
| Pfam |
PF00306.22 |
ATP synthase alpha/beta chain, C terminal domain |
5.1e-21 |
| Pfam |
PF00006.20 |
ATP synthase alpha/beta family, nucleotide-binding domain |
1.7e-112 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS203490PA |
| N. vitripennis |
NV11159-PA |
| D. melanogaster |
FBgn0032464 |
| H. sapiens |
ENSP00000273398 |
| D. melanogaster |
FBgn0263598 |
| A. aegypti |
AAEL008787 |
| P. vanderplanki |
Pv.17786 |
| H. sapiens |
ENSP00000419294 |
| P. vanderplanki |
Pv.17773 |
| C. quinquefasciatus |
CPIJ007772 |
| D. melanogaster |
FBgn0020368 |
| H. sapiens |
ENSP00000439874 |
| N. vitripennis |
NV10699-PA |
| H. melpomene |
HMEL014296-PA |
| P. humanus |
PHUM288180-PA |
| A. mellifera |
GB10989-PA |
| M. musculus |
ENSMUSG00000052459 |
| B. mori |
BGIBMGA008295-TA |
| A. gambiae |
AGAP003153 |
| S. invicta |
SI2.2.0_11459 |
| T. castaneum |
TC008354 |