MidgeBase gene description page [Pn.16926]
Outline
| Gene ID | Pn.16926 |
| Type | Protein coding gene |
| Scaffold | PnScaf45320 |
| Start | 5217 |
| End | 6350 |
| Direction | + |
Sequence
Transcript: 1068 (bp)
ATGAATTCAATCGTTCACACCGAACACAGAGATGTTATTCACGATTGTAGTTACGATTACTATGGACAACGAATGGCGACTTGCAGCTCAGACCAAACGATCAAAGTTTGGGAACAAAACGAAAAGGGGCAGTGGATAGTTTCCGCGAGTTGGAAAGCGCACAGCGGTTCAATCTGGCGTCTAACGTGGGCACATCCAGAGTTCGGCAACGTTCTTGCTTCGGCGTCTTTCGACAGGACGGCGAGCGTGTGGGAAGAGACGGCGGAGCAAAAGCCGACGCCGAGTTCGTCTGCTCCTAAACGCTGGATTCGCCGCACAAACCTCGTCGACAGCAGGACTTCGGTGACGGACGTCAAGTTCTCGCCCAAAAATCTCGGACTCGTGCTCGCCACCTCCTCCTCCGACGGCATCATCAGAATTTACGAGGCGCCCGACATCATGAATCTGTCACAGTGGACGCTCCAGCACGAAATCGGCTGCAAGCTACCGCTCTCCTCGATCAGCTGGAACCCGTCGCTGTTTCGAGCCCACGCGCCTATGATCGCTGCCGCCAGCGACGTCGCGACCTCCAACGAGCCGAAAGTCTTTGTCTTCGAGTACAGCGAGCTCAACCGGCGCTGGACAAAGACCGAAAACATCAACGTCACCGAGCCGGTTCACTCGATCGAGTTCGCGCCGAATGTCGGCAGAAGCTATCACGTGCTGGCAGTTGCCTCGAAAGACGTCAGCATTTTCAATTTGAAGCCGGTCATTGAGCAATCGGGAAGCACGAGGTTCGAGGTGACGCAGGCCGCTCAATTCAATGACAACTACTGCACCGTGTGGAAGGTCACTTGGAATGTCACGGGAACGCTGCTGGCCGCCTCATCAGACGACGGCTACGTGCGAATTTGGAAGATGAACTATCTCAAGGGATTCAAGTGCATCTGCTCGTACAAACCGTCGTCGGAGACGAGCGTCACTCACCCGATCGACTCACAAGCTGCCGCCATAATCAACTCAAACACGACCAAGTTCTTCAAGAAGGGTGTCGGCACTTTCGTCGCCTCAAATCAAATTCAGCAGCAC
Protein: 356 (aa)
MNSIVHTEHRDVIHDCSYDYYGQRMATCSSDQTIKVWEQNEKGQWIVSASWKAHSGSIWRLTWAHPEFGNVLASASFDRTASVWEETAEQKPTPSSSAPKRWIRRTNLVDSRTSVTDVKFSPKNLGLVLATSSSDGIIRIYEAPDIMNLSQWTLQHEIGCKLPLSSISWNPSLFRAHAPMIAAASDVATSNEPKVFVFEYSELNRRWTKTENINVTEPVHSIEFAPNVGRSYHVLAVASKDVSIFNLKPVIEQSGSTRFEVTQAAQFNDNYCTVWKVTWNVTGTLLAASSDDGYVRIWKMNYLKGFKCICSYKPSSETSVTHPIDSQAAAIINSNTTKFFKKGVGTFVASNQIQQH
| Type | Start | End | Length |
| CDS |
5217 |
5285 |
69 |
| CDS |
5349 |
6347 |
999 |
| intron |
5286 |
5348 |
63 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314068 |
AGAP005174-PA [Anopheles gambiae str. PEST] gb|EAA09566.2| AGAP005174-PA [Anopheles gambiae str. PEST] |
1e-136 |
| InterPro |
IPR017986 |
WD40-repeat-containing domain |
|
| InterPro |
IPR001680 |
WD40 repeat |
|
| InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
|
| InterPro |
IPR020472 |
G-protein beta WD-40 repeat |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00400.27 |
WD domain, G-beta repeat |
3.4e-31 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL006311 |
| P. vanderplanki |
Pv.11394 |
| T. castaneum |
TC009902 |
| C. quinquefasciatus |
CPIJ005525 |
| A. gambiae |
AGAP005174 |
| H. sapiens |
ENSP00000382779 |
| H. sapiens |
ENSP00000262124 |
| B. mori |
BGIBMGA004202-TA |
| S. invicta |
SI2.2.0_06939 |
| M. musculus |
ENSMUSG00000079614 |
| D. melanogaster |
FBgn0033247 |
| N. vitripennis |
NV11325-PA |
| A. mellifera |
GB17643-PA |
| P. humanus |
PHUM200070-PA |
| H. melpomene |
HMEL014580-PB |
| D. plexippus |
DPOGS202879PA |