MidgeBase gene description page [Pn.16919]
Outline
| Gene ID | Pn.16919 |
| Type | Protein coding gene |
| Scaffold | PnScaf45192 |
| Start | 46561 |
| End | 48248 |
| Direction | + |
Sequence
Transcript: 1413 (bp)
ATGAGCAACGAACGGCAACCACTGTTGATAAGCGATAGTGAGCAGCACAGCGCGCCGCCTCGACCTGATGTTCGCAATTCGCCCGAGAACATCATAGTAGACGGATCGGAAGATGAGAAGAATGTTGAGGATTATGACCCGTACAAGAACCGTAATCTGGAGCATCCGACAAGTAATTTGGAAACAATGATTCTCCTGATTAAGGGCAACATCGGAACTGGCATACTTGCCATGGGAGATGCATTCAAGAACTCGGGCTTGTATGTGGGCCTGTTCGGGACCTTCATACTGGGATTCATCTGCACCCACTGCATGCACATTCTTGTGAGGTGTTCCTATGAGCTTTGCTGTCGACTGCAAGTTCCGTCAATGAACTTCGCCTCCGTCGTCTACGCGAGCTTCGAAACGGGACCTTCGGGGTTGAGAAGGTATTCTCATCTAGCCAAAAATTTAATCAATCTATTCCTTATCATCACCCAAATTGGCTTCTGCTGTGTCTATTTCGTGTTTGTGGCCGTGAATTTGCAAGAAATTGTCGCCCACTACTGGATGAAGCTCGACACGCAGGTCTTTCTTATAATGATGCTCATTCCGATGATTCTTTTGAATCTGGTAAAGACGCTGAAGTACTTAACGCCATTCTCGTTTGTGGCCTCCATCCTGACCATCGTCGGACTCGTCATTTGCTTTTACTTCATGCTCCAGGATTTGCCGAGCATAAGGAGTGTAAAGCCCTTCGCAACGTGGTCGCAGCTCCCTCTCTTCTTCGGAACTGCCATTTACGCATTCGAAGGAATTGGCGTTGTGCTCCCGTTGGAAAACAATCTGAAGAACCCCGAAGTGTTCGGCTCGGGAATCGGAATTCTTAACGTCGGGATGTTTATCGTGGCATTCCTTTACACTGCAGTCGGTTTCTTCGGATACTTAAAGTATGGAGAAAACGTCCTCGGTTCGATAACTCTGAATTTGGGCAGCAACTTGCTTGCTCAGTCGGTCAGACTGATGATGGCACTGGCCATTTTTCTGAGCTACACAATTCAATTCTACGTTCCCGTTAACATCATCGGACCGTGGCTGAGGGCACAGCTGCATGGCGAGAGCAGACGGGTGTTTGGTGACTACGCTTTACGCATCGGACTTGTACTTATCACATTCTTGCTTGCCGTAATGATTCCGAACCTGGAGGTTGTAATTTCTCTCGTTGGCGCCGTTTCGTCTTCGGCATTGGCTCTGATTTTTCCGCCGCTCATCGAGATCATTACTTTCTGGCCGAATAAGCTGGGCAAGTATAATTGGATTATGATTAAGGACATTGTGATAATTATCATTGGCGTCTTGGGCTTTGTTTTTGGAACGTTTACGAGTCTAATGCAAATTTTGCAACCCCCGGCTTCGTCGCCAGAGAGCGGCGTA
Protein: 471 (aa)
MSNERQPLLISDSEQHSAPPRPDVRNSPENIIVDGSEDEKNVEDYDPYKNRNLEHPTSNLETMILLIKGNIGTGILAMGDAFKNSGLYVGLFGTFILGFICTHCMHILVRCSYELCCRLQVPSMNFASVVYASFETGPSGLRRYSHLAKNLINLFLIITQIGFCCVYFVFVAVNLQEIVAHYWMKLDTQVFLIMMLIPMILLNLVKTLKYLTPFSFVASILTIVGLVICFYFMLQDLPSIRSVKPFATWSQLPLFFGTAIYAFEGIGVVLPLENNLKNPEVFGSGIGILNVGMFIVAFLYTAVGFFGYLKYGENVLGSITLNLGSNLLAQSVRLMMALAIFLSYTIQFYVPVNIIGPWLRAQLHGESRRVFGDYALRIGLVLITFLLAVMIPNLEVVISLVGAVSSSALALIFPPLIEIITFWPNKLGKYNWIMIKDIVIIIIGVLGFVFGTFTSLMQILQPPASSPESGV
| Type | Start | End | Length |
| CDS |
46561 |
46690 |
130 |
| CDS |
46774 |
46873 |
100 |
| CDS |
46946 |
47499 |
554 |
| CDS |
47560 |
47997 |
438 |
| CDS |
48055 |
48245 |
191 |
| intron |
46691 |
46773 |
83 |
| intron |
46874 |
46945 |
72 |
| intron |
47500 |
47559 |
60 |
| intron |
47998 |
48054 |
57 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001845151 |
proton-coupled amino acid transporter 1 [Culex quinquefasciatus] gb|EDS39315.1| proton-coupled amino acid transporter 1 [Culex quinquefasciatus] |
1e-176 |
| InterPro |
IPR013057 |
Amino acid transporter, transmembrane |
|
| Pfam |
PF01490.13 |
Transmembrane amino acid transporter protein |
1.3e-76 |
| Pfam |
PF03317.8 |
ELF protein |
1.4 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000430305 |
| D. plexippus |
DPOGS205792PA |
| A. aegypti |
AAEL007458 |
| H. sapiens |
ENSP00000334223 |
| D. melanogaster |
FBgn0032036 |
| B. mori |
BGIBMGA010585-TA |
| A. gambiae |
AGAP000473 |
| C. quinquefasciatus |
CPIJ006318 |
| H. sapiens |
ENSP00000430535 |
| M. musculus |
ENSMUSG00000020261 |
| H. sapiens |
ENSP00000366942 |
| P. humanus |
PHUM590280-PA |
| A. gambiae |
AGAP008490 |
| A. aegypti |
AAEL002214 |
| C. quinquefasciatus |
CPIJ003511 |
| T. castaneum |
TC007038 |
| H. sapiens |
ENSP00000243389 |
| H. sapiens |
ENSP00000334750 |
| M. musculus |
ENSMUSG00000020264 |
| P. vanderplanki |
Pv.07048 |
| H. sapiens |
ENSP00000428140 |