MidgeBase gene description page [Pn.16894]
Outline
| Gene ID | Pn.16894 |
| Type | Protein coding gene |
| Scaffold | PnScaf45002 |
| Start | 3009 |
| End | 3638 |
| Direction | - |
Sequence
Transcript: 627 (bp)
ATGCGCTACACACTAGGCTACACCTTTACTGGAACGATTACCACACTTGCTTCGCTATGGATTCTCTACCATGTCCTCACTGGCCAGGGTGAAAGAATTTCTATCGGCTGGTTCTTGGAAGAAACTAGTCCATACATGTGGGCTTGCTTGGGAATCGCGTTCTCGGTTGCATTCTCTGTCGTCGGCGCTGCCATGGGAATTCACACGACGGGCGTTTCAATTGTCGGCGGCGGTGTTAAAGCTCCAAGAATCAAGACTAAGAACTTGATTTCGGTCATCTTCTGCGAAGCTGTTGCTATCTACGGGCTCATCACTGCCATCGTTCTGTCTGGTCTGCTCGAGCCATTCACAGTATCGGCAGCAATCGAGTCCGATGCATTGAAAGCGACAAACTGGATGGCCGGTCACGTTATGTTTGGTGCGGGATTAGCTGTCGGATTGGTCAATCTTTTCTGCGGTTTGGCTGTCGGCATCGTGGGCTCGGGTGCAGCTCTTGCCGATGCAGCGAATTCAAATCTTTTCGTCAAAATTCTCATCGTTGAAATTTTCGGATCCGCCATCGGTCTTTTCGGTCTTATTGTTGGCATTTATATGACCAGCAAAGTGAAGATGGGAGACAAAGTGGCA
Protein: 209 (aa)
MRYTLGYTFTGTITTLASLWILYHVLTGQGERISIGWFLEETSPYMWACLGIAFSVAFSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGLLEPFTVSAAIESDALKATNWMAGHVMFGAGLAVGLVNLFCGLAVGIVGSGAALADAANSNLFVKILIVEIFGSAIGLFGLIVGIYMTSKVKMGDKVA
| Type | Start | End | Length |
| CDS |
3012 |
3638 |
627 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846404 |
vacuolar ATP synthase 21 kDa proteolipid subunit [Culex quinquefasciatus] gb|EDS43494.1| vacuolar ATP synthase 21 kDa proteolipid subunit [Culex quinquefasciatus] |
5e-87 |
| InterPro |
IPR002379 |
ATPase, F0/V0 complex, subunit C |
|
| InterPro |
IPR000245 |
ATPase, V0 complex, proteolipid subunit C |
|
| Gene Ontology(BP) |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
| Gene Ontology(CC) |
GO:0033179 |
proton-transporting V-type ATPase, V0 domain |
|
| Gene Ontology(CC) |
GO:0033177 |
proton-transporting two-sector ATPase complex, proton-transporting domain |
|
| Gene Ontology(MF) |
GO:0015078 |
hydrogen ion transmembrane transporter activity |
|
| Pfam |
PF00420.19 |
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L |
1.2 |
| Pfam |
PF00137.16 |
ATP synthase subunit C |
4.4e-27 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM004600-PA |
| B. mori |
BGIBMGA000231-TA |
| P. vanderplanki |
Pv.09565 |
| M. musculus |
ENSMUSG00000033379 |
| C. quinquefasciatus |
CPIJ004794 |
| A. gambiae |
AGAP009334 |
| D. melanogaster |
FBgn0028662 |
| A. aegypti |
AAEL012113 |
| N. vitripennis |
NV12316-PA |
| D. plexippus |
DPOGS210123PA |
| A. mellifera |
GB17836-PA |
| T. castaneum |
TC000524 |
| H. sapiens |
ENSP00000432754 |
| H. sapiens |
ENSP00000431605 |
| H. melpomene |
HMEL010699-PA |