MidgeBase gene description page [Pn.16841]
Outline
| Gene ID | Pn.16841 |
| Type | Protein coding gene |
| Scaffold | PnScaf44530 |
| Start | 732 |
| End | 2477 |
| Direction | - |
Sequence
Transcript: 1290 (bp)
ATGGGTAACTGTAAAGAATTAAGCATAAATTATTCAAGCCAAGGAAGCCTAGATTCCGATAATAGCCTAACAGGTGGAAAAATAAAGGCTCCAGCGCAGAAACTCGAGTTTTCTGATTTTGAGAAAATCTACAAGAGCATCAACCAGAACATTTCGGAGTATGGATCTAACTATGGTCTCCAAGAGAATTCGCTAGGTGCTCTTCTTTCGCCGCTAATTGCTACGTCGAAGTTGCCTCCACATTTTTCTCAATACGAGTTACAGCATCGACCACGAGTCATCAACAGACGACGCATTGAACCGGACTATGAAATAGAAAAGATCGAAAACTACATCAAATTGGAGCTCATCGGTCAGGGAACGTATGGGAGGGTTTACAAGTCCATGGACGTGAAACGGAACAAGTTTGTGGCGCTCAAAAACATCCGCTTAGAACCAGAAGTCGAGGGATTTCCCATCACGAGTCTGCGTGAAATAAAAATCTTAACTCAATTGAAGCATGAAAACATCGTGAAGCTCCTCGATATTGTACACGATGAGAAACGGTTGGCCTCAACCTATATCGTATTTGAGTACATGAACCACGATTTGAACGGGCTGCTGCAGAATGCTGACATGGCGTTTAACGAGGACAACATTTACCAAATAACTCGGCAATTGCTGAACGGTTTGTTGTACTGTCATAGTGAAAATGTCGTTCATCGGGACCTGAAGACGTCAAATATCTTGGTGAATAATCGAGGGCAGGTGAAAATAGCTGATTTTGGATTAGCGCGTCAGTGGGAACCAAGTAGGCCGTTCACCAACAAAGTAATTTCGCTGTGGTACCGGCCAATCGAGTTGCTTCTCGGCGAAGAATTCTATGACTTTTCGGCCGACGTGTGGTCCCTTGGATGCATCGTTGTGGAGCTGTTTCAACGCTATCCACTCTTCCCGTACAACACGGAGTTAAAAATGATTCAAGAAATTTACAACGTCTGTGGCTCGCCGGAAGCCAATAACTGGAAAAATGCGAGGAATCTTCCAAACTTTATGAAGCACAAGCGCCGAGAGAGAGTTTTAAAAAAATTTCTCGTTGCAATTCCGAAGCTTGCGCTCGACCTGATCGACAAGATGCTTGCACTCGATCCTACGCGCCGGATCACAATTAGCTCCGCTGTGCAATCGGAGTGGATTCAAACGATGCAGAAGAAAAAACTCGAGCCGATGACTCTGCCATCGATAGACAGCTTCGAAATGAAGATGCGGAAAGGTCTGATGTACCACGAAATGAAGAAGAAAGAAGAGATT
Protein: 430 (aa)
MGNCKELSINYSSQGSLDSDNSLTGGKIKAPAQKLEFSDFEKIYKSINQNISEYGSNYGLQENSLGALLSPLIATSKLPPHFSQYELQHRPRVINRRRIEPDYEIEKIENYIKLELIGQGTYGRVYKSMDVKRNKFVALKNIRLEPEVEGFPITSLREIKILTQLKHENIVKLLDIVHDEKRLASTYIVFEYMNHDLNGLLQNADMAFNEDNIYQITRQLLNGLLYCHSENVVHRDLKTSNILVNNRGQVKIADFGLARQWEPSRPFTNKVISLWYRPIELLLGEEFYDFSADVWSLGCIVVELFQRYPLFPYNTELKMIQEIYNVCGSPEANNWKNARNLPNFMKHKRRERVLKKFLVAIPKLALDLIDKMLALDPTRRITISSAVQSEWIQTMQKKKLEPMTLPSIDSFEMKMRKGLMYHEMKKKEEI
| Type | Start | End | Length |
| CDS |
735 |
767 |
33 |
| CDS |
1163 |
2307 |
1145 |
| CDS |
2366 |
2477 |
112 |
| intron |
768 |
1162 |
395 |
| intron |
2308 |
2365 |
58 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
BAD32543 |
mKIAA1791 protein [Mus musculus] |
3e-84 |
| InterPro |
IPR017441 |
Protein kinase, ATP binding site |
|
| InterPro |
IPR000719 |
Protein kinase, catalytic domain |
|
| InterPro |
IPR002290 |
Serine/threonine- / dual-specificity protein kinase, catalytic domain |
|
| InterPro |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
|
| InterPro |
IPR008271 |
Serine/threonine-protein kinase, active site |
|
| InterPro |
IPR011009 |
Protein kinase-like domain |
|
| Gene Ontology(BP) |
GO:0006468 |
protein phosphorylation |
|
| Gene Ontology(MF) |
GO:0004713 |
protein tyrosine kinase activity |
|
| Gene Ontology(MF) |
GO:0004674 |
protein serine/threonine kinase activity |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004672 |
protein kinase activity |
|
| Gene Ontology(MF) |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
| Pfam |
PF00069.20 |
Protein kinase domain |
5.2e-69 |
| Pfam |
PF06293.9 |
Lipopolysaccharide kinase (Kdo/WaaP) family |
0.0064 |
| Pfam |
PF01636.18 |
Phosphotransferase enzyme family |
0.016 |
| Pfam |
PF07714.12 |
Protein tyrosine kinase |
4.4e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.16717 |