MidgeBase gene description page [Pn.16658]
Outline
| Gene ID | Pn.16658 |
| Type | Protein coding gene |
| Scaffold | PnScaf41927 |
| Start | 3097 |
| End | 4915 |
| Direction | + |
Sequence
Transcript: 1494 (bp)
ATGGACACAATCACGTTCATAATTATTTCGATTTGCATATTTTTTGGATGGTACTACAACAAGTATCGTGAGCGGATGGCACTCGTTGCAAAATTGCCGGGACCATATCGATGGCCAATAATCGGCAATGCAGGACTTTTCGTATGGAAATCCCCTCCAGAAATGGTGAAAATTTTTGGAGAATTTCATCGACAATTTCCAAGAATCACTTGCTTTATGCTCGGACCACAACCGGAAATTCTCATCACCGATCCAAAGCTTGCTGAAATTGTGCTTGGCAGTCAAAAGCTAATCGATAAATCGGACGAGTACATTTTTATAAGCGATTGGCTTGCGACAGGTCTATTGACAGCTACTGGCAATAAATGGTTTTCTCGAAGGAAAGTCATCACGCCAGCATTCCACTTTAAGATTCTTGACCAATTTGTTGAAATTTTCGACAAGCAAAGTGCAGTTTTTATTGAAAACTTGGCCAAATCTAAAGGTCAACCGCTGGATGTCTTTCAACCAATTACACTTTGCGCTCTCGATATCATCTGCGAAACTGCAATGGGTGTTCAAATACAAGCACAAGTGAATTCCGACTCCGTTTACGTACAAGCCGTGAAGGAAATTAGCGGATTATTGAGCAAGAGGATCTTCACTTTCTACCTTCGGAACGAATTCATATTTAGGTTGTCTAGTTTAGGACGAAGACAAAAGGAGTTGATAAAAATTTTGCACAGCTTTACCGATGAGGTCATCGTTCAGCGCCGCGAGGAGCTCATGAAGAGTAGCAGCAAAGATGAAGAACACGACCAAGACGATATCGGCGTGAAGAGAAAGATGGCCTTTCTTGACATTCTTCTGCAATCGACTATAAATGGAAAACCCCTAACTAACTTGGACATCCGCGAGGAAGTTGACACATTTATGTTCGAGGGACATGACACAACGAGCAGCGGAATCGCCTTCTGTCTCTACAGCCTTGCAAAGTTCCCGGAGGTTCAAAAGAAGGCTTACGAGGAAGTGCGTCACGTGATTGGGGACGACAACGACACACCGGTCACAATCAAACTGCTCAACGACTTGAACTACCTCGAGATGGTGATTAAAGAGACTCTAAGACTGTATCCAAGTGTACCCATGTACGGAAGGAAAATGCAGGAAAACGTCGATATGAACGGCTTCATAATTCCCAAAGGTGCAAACGTCGCTGTCAGTCCATTTTATATGGCGCGTGATCCAACGCTTTGGGAAAATCCCCTCGAATTTATTCCCGAAAGATTCGAGTCGGATAAGCAATATCATCCGTATCTGAATGTACCATTTAGCGCTGGCCCCAGAAACTGCATCGGACAAAAGTTTGCGATGCTCGAGATGAAGAGTACAATCTCGAAGGTTTTGAGAAACTTTGAGCTATCTGTGGCTGATGGCTACGAACCTGTTCTCGTTGCTGAACTTATTTTGAGACCGGACAATGGAGTGTGGCTCAAATTGAACAAACGAAAATCT
Protein: 498 (aa)
MDTITFIIISICIFFGWYYNKYRERMALVAKLPGPYRWPIIGNAGLFVWKSPPEMVKIFGEFHRQFPRITCFMLGPQPEILITDPKLAEIVLGSQKLIDKSDEYIFISDWLATGLLTATGNKWFSRRKVITPAFHFKILDQFVEIFDKQSAVFIENLAKSKGQPLDVFQPITLCALDIICETAMGVQIQAQVNSDSVYVQAVKEISGLLSKRIFTFYLRNEFIFRLSSLGRRQKELIKILHSFTDEVIVQRREELMKSSSKDEEHDQDDIGVKRKMAFLDILLQSTINGKPLTNLDIREEVDTFMFEGHDTTSSGIAFCLYSLAKFPEVQKKAYEEVRHVIGDDNDTPVTIKLLNDLNYLEMVIKETLRLYPSVPMYGRKMQENVDMNGFIIPKGANVAVSPFYMARDPTLWENPLEFIPERFESDKQYHPYLNVPFSAGPRNCIGQKFAMLEMKSTISKVLRNFELSVADGYEPVLVAELILRPDNGVWLKLNKRKS
| Type | Start | End | Length |
| CDS |
3097 |
3637 |
541 |
| CDS |
3735 |
3804 |
70 |
| CDS |
3895 |
4445 |
551 |
| CDS |
4511 |
4673 |
163 |
| CDS |
4744 |
4912 |
169 |
| intron |
3638 |
3734 |
97 |
| intron |
3805 |
3894 |
90 |
| intron |
4446 |
4510 |
65 |
| intron |
4674 |
4743 |
70 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003436121 |
AGAP013241-PA [Anopheles gambiae str. PEST] gb|EGK96892.1| AGAP013241-PA [Anopheles gambiae str. PEST] |
1e-150 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
1.3e-115 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.05621 |
| Pn.05622 |
| Pn.16660 |
| Pn.16659 |
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL009876-PA |
| A. aegypti |
AAEL007816 |
| T. castaneum |
TC015992 |
| T. castaneum |
TC014641 |
| T. castaneum |
TC002721 |
| T. castaneum |
TC014125 |
| A. aegypti |
AAEL007808 |
| T. castaneum |
TC013679 |
| D. melanogaster |
FBgn0005670 |
| T. castaneum |
TC013681 |
| T. castaneum |
TC010423 |
| T. castaneum |
TC013773 |
| C. quinquefasciatus |
CPIJ800247 |
| A. aegypti |
AAEL007815 |
| P. vanderplanki |
Pv.04249 |
| D. plexippus |
DPOGS205157PA |
| P. vanderplanki |
Pv.04250 |
| A. gambiae |
AGAP012957 |
| A. aegypti |
AAEL007807 |
| C. quinquefasciatus |
CPIJ009477 |
| A. gambiae |
AGAP002418 |
| A. aegypti |
AAEL007795 |
| C. quinquefasciatus |
CPIJ800249 |
| P. vanderplanki |
Pv.04248 |
| C. quinquefasciatus |
CPIJ800248 |
| T. castaneum |
TC013680 |
| A. gambiae |
AGAP013241 |
| C. quinquefasciatus |
CPIJ800250 |
| P. vanderplanki |
Pv.13287 |
| P. vanderplanki |
Pv.13286 |
| D. melanogaster |
FBgn0011576 |
| D. melanogaster |
FBgn0023541 |
| C. quinquefasciatus |
CPIJ020229 |
| T. castaneum |
TC013772 |
| A. gambiae |
AGAP002419 |
| C. quinquefasciatus |
CPIJ800251 |