MidgeBase gene description page [Pn.16594]
Outline
| Gene ID | Pn.16594 |
| Type | Protein coding gene |
| Scaffold | PnScaf40977 |
| Start | 1465 |
| End | 2685 |
| Direction | + |
Sequence
Transcript: 693 (bp)
ATGAATCCCGAAAAGTTGAAGAAGCTGCAAGCTCAAGCGGCACAGGTGCGAATTGGTGGAAAAGGAACACCTCGCCGCAAAAAGAAGATTGTTCATCAAACTGCAGCTACCGACGATAAGAAACTGCAATCAACTCTGAAAAAGTTAGCAGTCAATAACATACCTGGTATCGAAGAGGTTAATTTGATTAAAAATGACGGAACCGTCATCCATTTCAACAATCCAAAAACTCAGGCATCACTTGCAAGCAACGTTTTTGCGATTACAGGACATGGCGAACAAAAACAGATTGCAGAGCTGTTGCCAGGAATTCTCACACAGCTGGGCTCTGAGGGTTTGTCTCAATTGAAACGATTAGCCAATAATGTTGGAATTGGAAGTAAAATCTTAAGTTCGGTTGAGGAGGGCAAAGAAGAAGAAGACATCCCAGATTTAGTGGAAAACTTTGAGAATGTTGCCAACTCTGAGGCGAAACCAACTGAAGCACCACCGGCATCACAAGCTAAGGAAGCTGAAAAGAAGGTCGAAGAGGTGGCACCGGCCGCGCCAGCCCCCGCCGCCGAAAAGACTGCAGCTCCTGCTATAGAAAAGGAAAAGCCAGCCGATGAAAAGAAAGAACCGAAAAAGGATACGACACCAAAAAAATCGAATGAAAAGAGTGGCAAAAAGCAACAGTCAAAGGATAAAAAAGCT
Protein: 231 (aa)
MNPEKLKKLQAQAAQVRIGGKGTPRRKKKIVHQTAATDDKKLQSTLKKLAVNNIPGIEEVNLIKNDGTVIHFNNPKTQASLASNVFAITGHGEQKQIAELLPGILTQLGSEGLSQLKRLANNVGIGSKILSSVEEGKEEEDIPDLVENFENVANSEAKPTEAPPASQAKEAEKKVEEVAPAAPAPAAEKTAAPAIEKEKPADEKKEPKKDTTPKKSNEKSGKKQQSKDKKA
| Type | Start | End | Length |
| CDS |
1465 |
1528 |
64 |
| CDS |
1667 |
1890 |
224 |
| CDS |
2278 |
2682 |
405 |
| intron |
1529 |
1666 |
138 |
| intron |
1891 |
2277 |
387 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFZ09605 |
hypothetical protein SINV_01877 [Solenopsis invicta] |
9e-58 |
| InterPro |
IPR002715 |
Nascent polypeptide-associated complex NAC |
|
| Pfam |
PF07830.8 |
Protein serine/threonine phosphatase 2C, C-terminal domain |
0.35 |
| Pfam |
PF01849.13 |
NAC domain |
1.6e-20 |
| Pfam |
PF06459.7 |
Ryanodine Receptor TM 4-6 |
2.1 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02698 |
| M. musculus |
ENSMUSG00000028568 |
| B. mori |
BGIBMGA010751-TA |
| H. melpomene |
HMEL016895-PA |
| S. invicta |
SI2.2.0_01877 |
| H. sapiens |
ENSP00000360664 |
| N. vitripennis |
NV10171-PA |
| A. aegypti |
AAEL014932 |
| C. quinquefasciatus |
CPIJ004906 |
| D. melanogaster |
FBgn0000181 |
| H. sapiens |
ENSP00000338516 |
| P. vanderplanki |
Pv.06337 |
| A. aegypti |
AAEL012271 |
| M. musculus |
ENSMUSG00000021660 |
| A. gambiae |
AGAP006614 |
| T. castaneum |
TC012217 |
| P. humanus |
PHUM204940-PA |