MidgeBase gene description page [Pn.16546]
Outline
| Gene ID | Pn.16546 |
| Type | Protein coding gene |
| Scaffold | PnScaf40404 |
| Start | 487 |
| End | 1341 |
| Direction | - |
Sequence
Transcript: 510 (bp)
ATGGCAAATCAGAGTGGAATTCCTGACAAAATGTGGCAGCCGCCACTCGTGACCGTAGAGACAACCCTCGGTGACTTCACCGTCGAACTTTACTGGAAGCACGCGCCAAACACTTGCCGGAACTTTGCTGAGCTTGCCCGTCGGGGCTATTACAATGACGTTGTTTTCCACCGGATCATTGCCGATTTCATGATCCAGGGTGGCGATCCGACCGGCACTGGGCGCGGAGGCAGCTCGATTTACGGCCCAACGTTTGCCGACGAAATTCATCCAGAATTGAGGCATGCCGGTGCCGGCATTCTGTCCATGGCTAACGCTGGACCGAATACCAATGGGAGCCAGTTTTTCATAACGCTCGCACCGTGTCAACATCTGGACGGAAAGCATGCGATTTTCGGGAGAATTCACAGCGGAATGCAAGTGATTAAGCGAATGGGCAACGTCGAGACCGACAACAACGATCGACCACTCGAAAATGTAAAAATTATTAGCGCGAGAATGGAAAAATAT
Protein: 170 (aa)
MANQSGIPDKMWQPPLVTVETTLGDFTVELYWKHAPNTCRNFAELARRGYYNDVVFHRIIADFMIQGGDPTGTGRGGSSIYGPTFADEIHPELRHAGAGILSMANAGPNTNGSQFFITLAPCQHLDGKHAIFGRIHSGMQVIKRMGNVETDNNDRPLENVKIISARMEKY
| Type | Start | End | Length |
| CDS |
490 |
661 |
172 |
| CDS |
950 |
1222 |
273 |
| CDS |
1277 |
1341 |
65 |
| intron |
662 |
949 |
288 |
| intron |
1223 |
1276 |
54 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001652536 |
cyclophilin [Aedes aegypti] gb|EAT41295.1| cyclophilin [Aedes aegypti] |
1e-75 |
| InterPro |
IPR002130 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain |
|
| InterPro |
IPR020892 |
Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(MF) |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
|
| Pfam |
PF00160.16 |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
9.9e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.14587 |
| H. sapiens |
ENSP00000362803 |
| A. gambiae |
AGAP012376 |
| D. melanogaster |
FBgn0035141 |
| A. aegypti |
AAEL007061 |
| B. mori |
BGIBMGA002151-TA |
| P. humanus |
PHUM463210-PA |
| C. quinquefasciatus |
CPIJ014089 |
| N. vitripennis |
NV13269-PA |
| T. castaneum |
TC003442 |
| D. plexippus |
DPOGS201358PA |
| H. melpomene |
HMEL014707-PA |
| S. invicta |
SI2.2.0_11820 |