MidgeBase gene description page [Pn.16522]
Outline
| Gene ID | Pn.16522 |
| Type | Protein coding gene |
| Scaffold | PnScaf39925 |
| Start | 94 |
| End | 3600 |
| Direction | + |
Sequence
Transcript: 2016 (bp)
ATGGATCCGAGGGGCGACGTGATTTTGGCTTACGAAATGAACGGCGAACCTTTGACACGAGACCACGGATTTCCGTTGAGATGCGTCGTTCCGGGCGTTGTCGGAGCAAGAAACGTCAAATGGCTGGGGAAAATAAAAATCTCCGAAAAGGAAGCCGAATCGCACTGGCAGCAAGGCGATTACAAGGCCTTCAGTCCGAGCACAGATTGGGATACTGTTGATTTCAAGACAGCTCCTGCCATACAAAATTTGCCGGTCACGTCGGCCATTTGTTCGCCCAATCCCAACGATCACGAGATTAAAGTTGTTGACGGGCACATGGAGGTGAAAGGCTATGCATATTCGGGAGGCGGCAATAAAATCATTCGAGTCGACATCACATGGGATCAGGGTAAAACTTGGCACACAGCGGAACTTCAACAGCTGTCAGACGGCGAAAATGTCTCTGCCGGTCGCCACTACGCGTGGACTCTTTGGACAATTCGGGTGCCAATTGAAGCGAATCAAAAATACGTCGAAGTTTGGTCGAAAGCTGTTGATTCAAACTACAATTGCCAGCCCGAGACGTTTAAGAACACGTGGAACCTTCGAGGCGTCGTGGCTAACGCGTACTCGAGAGTCGGGCAATGGCAGTTGAAACCGGGAACGATTCTGTATAAACTTTGGGAAAACCCACCTCAGCCAATATACTTGGACGTATATTTTTTTAATTGGACAAACCCGCAAGACTTCAATAATGAAACTATTAGACCGAGATTCGAAGAAGTCGGACCGTATCGGTTCCAAGAATTTCCGCAGAAAGTGAATGTAACGTATCACACGACAAATGAGACAATCAGCTATAGGAAGCAGAGCCGCTACATCTTCTTGCCGAATGAAAGCAAAGGCAAATTAACGGACAACATCACATCGGTGAATGTTGTCGCGTTATCAGCCGCGAATCAGGCCAGAAGTTGGAACATTTTCAAGGTGAAAGGTGTAGAGTTGAGCTTGAAATTTTTCGGACAGCAAATACACCTCACAAAAACAGCATCGCAACTGCTCTTTGAAGGATACGACGACCCGATCATTGGCGTTGCTAGAGAAATCGCAAAACTAATGGGAATCGATGTTCCTTTTGACCGTTTTGGCTGGTTTTACAGTCGTAACGAGTCAAGTTTATTAACGGGCAATTTTAATGTAGAGTCTGCAACTTCATCGCTCGGTCAATTAAATCAGTGGAACCACAACTCAAAGTCGAGTTTCTTTGAAGGAAGCTGCGCCAATTTGCAAGGGTCATCGGCAGGAGAGTTGTTTCCGCCGAAGATAAGCGCCAAGACGGACAGCATTTCTATGTTCTCGCCCGAAATGTGTCGGAATGTTGAATTAGAGAAAGAAGCACAACTCGATTTCGAAGGCATTCAGGCTTCAAAGTTCATTGGCGGAGATAAAACAGTTGACAATGGAACAAAATACGAGTCCAACAAGTGCTTTTGTTCTGGTGAATGTGTGCCAAGTGGAGTCTTGAATGTGACTGCATGTCGTCTTGGTGCACCCGTTTTCATGTCGTATCCTCACTTTTATCAAGCGGACGAGAGTTACATAAATGACATTGAAGGCATGGCTCCCGATAAGAGAAAACATCAGTTTTACGTTATACTGGAGCCGAAAACGTCAATTCCTCTCGAGATTGCAGGGCGATTTCAATTGAATGTGCTGATGAAGCCAATTCATAATATAAATATGTACAAGAACGTACCGACAAAGTTTCTACCGGTTGTATGGTTCGAGCAGCGTTTTAAGGCAAATTCCAGCATTGCTCGGAATATTCGAATATTTCTGGCCGTCCCCGTAATTGGTCAAGTTTTCGGGTTCATCATCGCATTGATTGGAATTTATGGTATCTTTAGGCTAACTACCACTCACAAGAGAAAGGAGCATTTATCAATCATTCGAGACAACAACTACAATTCCGTACCTTTAAACCCCCCTCTCAAAGAGACCAACAACAACCAGAACAAAAGACTACTGCTTGAT
Protein: 672 (aa)
MDPRGDVILAYEMNGEPLTRDHGFPLRCVVPGVVGARNVKWLGKIKISEKEAESHWQQGDYKAFSPSTDWDTVDFKTAPAIQNLPVTSAICSPNPNDHEIKVVDGHMEVKGYAYSGGGNKIIRVDITWDQGKTWHTAELQQLSDGENVSAGRHYAWTLWTIRVPIEANQKYVEVWSKAVDSNYNCQPETFKNTWNLRGVVANAYSRVGQWQLKPGTILYKLWENPPQPIYLDVYFFNWTNPQDFNNETIRPRFEEVGPYRFQEFPQKVNVTYHTTNETISYRKQSRYIFLPNESKGKLTDNITSVNVVALSAANQARSWNIFKVKGVELSLKFFGQQIHLTKTASQLLFEGYDDPIIGVAREIAKLMGIDVPFDRFGWFYSRNESSLLTGNFNVESATSSLGQLNQWNHNSKSSFFEGSCANLQGSSAGELFPPKISAKTDSISMFSPEMCRNVELEKEAQLDFEGIQASKFIGGDKTVDNGTKYESNKCFCSGECVPSGVLNVTACRLGAPVFMSYPHFYQADESYINDIEGMAPDKRKHQFYVILEPKTSIPLEIAGRFQLNVLMKPIHNINMYKNVPTKFLPVVWFEQRFKANSSIARNIRIFLAVPVIGQVFGFIIALIGIYGIFRLTTTHKRKEHLSIIRDNNYNSVPLNPPLKETNNNQNKRLLLD
| Type | Start | End | Length |
| CDS |
94 |
717 |
624 |
| CDS |
1930 |
2084 |
155 |
| CDS |
2151 |
2514 |
364 |
| CDS |
2590 |
2888 |
299 |
| CDS |
2959 |
3163 |
205 |
| CDS |
3229 |
3597 |
369 |
| intron |
718 |
1929 |
1212 |
| intron |
2085 |
2150 |
66 |
| intron |
2515 |
2589 |
75 |
| intron |
2889 |
2958 |
70 |
| intron |
3164 |
3228 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314281 |
AGAP003373-PA [Anopheles gambiae str. PEST] gb|EAA09639.4| AGAP003373-PA [Anopheles gambiae str. PEST] |
1e-113 |
| InterPro |
IPR014756 |
Immunoglobulin E-set |
|
| InterPro |
IPR002159 |
CD36 antigen |
|
| InterPro |
IPR008335 |
Eukaryotic molybdopterin oxidoreductase |
|
| InterPro |
IPR005066 |
Moybdenum cofactor oxidoreductase, dimerisation |
|
| InterPro |
IPR000572 |
Oxidoreductase, molybdopterin-binding domain |
|
| Gene Ontology(BP) |
GO:0007155 |
cell adhesion |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0046872 |
metal ion binding |
|
| Gene Ontology(MF) |
GO:0030151 |
molybdenum ion binding |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF00174.14 |
Oxidoreductase molybdopterin binding domain |
9.5e-22 |
| Pfam |
PF03404.11 |
Mo-co oxidoreductase dimerisation domain |
4.4e-37 |
| Pfam |
PF01130.16 |
CD36 family |
5.8e-129 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV17244-PA |
| S. invicta |
SI2.2.0_10299 |
| H. sapiens |
ENSP00000348440 |
| H. sapiens |
ENSP00000450264 |
| H. sapiens |
ENSP00000266971 |
| D. melanogaster |
FBgn0030966 |
| P. vanderplanki |
Pv.05110 |
| B. mori |
BGIBMGA005750-TA |
| D. plexippus |
DPOGS202961PA |
| A. aegypti |
AAEL014110 |
| M. musculus |
ENSMUSG00000049858 |
| A. aegypti |
AAEL014252 |
| P. humanus |
PHUM238870-PA |
| H. sapiens |
ENSP00000377668 |
| T. castaneum |
TC000220 |
| A. mellifera |
GB19854-PA |
| H. sapiens |
ENSP00000377674 |
| H. sapiens |
ENSP00000450245 |
| C. quinquefasciatus |
CPIJ004455 |
| A. gambiae |
AGAP010877 |