MidgeBase gene description page [Pn.16426]
Outline
| Gene ID | Pn.16426 |
| Type | Protein coding gene |
| Scaffold | PnScaf38446 |
| Start | 4186 |
| End | 5974 |
| Direction | - |
Sequence
Transcript: 1521 (bp)
ATGCAAGCAAACATCCGACAAGTTGCTTCATTGCTTTCGAAGTTGAATTTCAACGCTGTTCACCGATCAGCAGCTGCTTCCGGTGTGCATCAATTCCGTCTCTATTCGACAACGCACGATGCCGATTTGGTTGTAATTGGAGGCGGTCCTGGCGGTTATGTTGCCGCAATTAAGGGCGCTCAGGTCGGCCTCAACACAGTCTGCATTGAGAAGAACGACACACTCGGCGGTACTTGCCTCAACGTCGGATGCATTCCCTCAAAAGCCCTCCTCAACAACTCGCACTACTATCACATGGCTCACTCGGGAGACCTCGATAGTCGCGGCATTTCAGTCGGAAATGTCTCGCTGGATTTGGAGAAGATGATGGGACAGAAGTCAAATGCCGTCAAGTCGCTGACTGGCGGAATTGCACAGTTGTTCAAGAAGAACAAGGTGACTCACGTGAACGGCTGGGGACAAATCACTGGACCGAACCAAGTGCAGGCGAAAATGAACGACGGATCTATCGAGACGGTCAACGCGAAATACATGATTCTCGCCACTGGCTCAGAAGTCACACCGTTTCCCGGAATCGAAATTGACGAGGAGGTGATTGTCTCCAGCACGGGTGCTCTGAGCTTGAAGCAGGTGCCGAAGAAGATGGTTGTCATTGGCGCCGGCGTCATTGGCCTCGAGTTGGGTTCAGTGTGGTCGCGTCTCGGCGCAGAAGTTATTGCCGTCGAATTTTTGACGAGCATTGGCGGCGTCGGTATCGACGGTGAAGTTTCAAAGACCTTCCAGAAAGTACTCACAAAGCAGGGCATGCAGTTCAAGCTCGGAACAAAAGTCACAGGCGCTCAACGCACCGGAAACGGAGTGACAGTTTCAGTCGAGTCGGTGAAGGATGGCTCAAAGGAGGACATTGAGTGTGACGTTCTTCTCGTCTGCATCGGACGTCGTCCATACACCGAAGGCTTGGGCCTTGAGAATGTCGGCATCGCCACCGACGACCGCGGACGCATCCCCGTGAACGCCATGCTGCAAACAATCGTGCCGAACATCCACGCAATCGGAGACGTCATTCACGGACCGATGTTGGCGCATAAAGCAGAGGACGAGGGAATCATCTGTGTCGAAGGAATCATGGGAGGACATGTACATCTCGACTACAATTGCGTTCCATCTGTCGTCTACACGCATCCCGAAGTGGCATGGGTTGGAAAGACCGAAGAGGATCTGAAAAAGGAGGGAGTTGAATACAAGGTTGGAAAATTCCCGTACATGGCCAACTCGCGTGCAAAGACAAACAACGAGACTGACGGATTCGTGAAGGTTCTTGCCGACAAAGCTACAGATCGCATTTTAGGCACGCACATGATTGGACCGGGTGTGGGAGAGCTTATCAATGAATCTGTATTGGCCATGGAATATGGAGCATCTGCCGAGGATGTCGCTCGAGTTTGTCATGCACATCCAACGTGCGCTGAGGCACTCAGGGAAGCAAATTTGGCAGCATACATTGGAAAACCAATTAACTTC
Protein: 507 (aa)
MQANIRQVASLLSKLNFNAVHRSAAASGVHQFRLYSTTHDADLVVIGGGPGGYVAAIKGAQVGLNTVCIEKNDTLGGTCLNVGCIPSKALLNNSHYYHMAHSGDLDSRGISVGNVSLDLEKMMGQKSNAVKSLTGGIAQLFKKNKVTHVNGWGQITGPNQVQAKMNDGSIETVNAKYMILATGSEVTPFPGIEIDEEVIVSSTGALSLKQVPKKMVVIGAGVIGLELGSVWSRLGAEVIAVEFLTSIGGVGIDGEVSKTFQKVLTKQGMQFKLGTKVTGAQRTGNGVTVSVESVKDGSKEDIECDVLLVCIGRRPYTEGLGLENVGIATDDRGRIPVNAMLQTIVPNIHAIGDVIHGPMLAHKAEDEGIICVEGIMGGHVHLDYNCVPSVVYTHPEVAWVGKTEEDLKKEGVEYKVGKFPYMANSRAKTNNETDGFVKVLADKATDRILGTHMIGPGVGELINESVLAMEYGASAEDVARVCHAHPTCAEALREANLAAYIGKPINF
| Type | Start | End | Length |
| CDS |
4189 |
4251 |
63 |
| CDS |
4313 |
4402 |
90 |
| CDS |
4463 |
5788 |
1326 |
| CDS |
5933 |
5974 |
42 |
| intron |
4252 |
4312 |
61 |
| intron |
4403 |
4462 |
60 |
| intron |
5789 |
5932 |
144 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001869981 |
dihydrolipoamide dehydrogenase [Culex quinquefasciatus] gb|EDS31040.1| dihydrolipoamide dehydrogenase [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR013027 |
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|
| InterPro |
IPR016156 |
FAD/NAD-linked reductase, dimerisation |
|
| InterPro |
IPR006258 |
Dihydrolipoamide dehydrogenase |
|
| InterPro |
IPR012999 |
Pyridine nucleotide-disulphide oxidoreductase, class I, active site |
|
| InterPro |
IPR004099 |
Pyridine nucleotide-disulphide oxidoreductase, dimerisation |
|
| InterPro |
IPR023753 |
Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(BP) |
GO:0045454 |
cell redox homeostasis |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0004148 |
dihydrolipoyl dehydrogenase activity |
|
| Gene Ontology(MF) |
GO:0050660 |
flavin adenine dinucleotide binding |
|
| Gene Ontology(MF) |
GO:0016668 |
oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF01494.14 |
FAD binding domain |
3.5e-08 |
| Pfam |
PF01266.19 |
FAD dependent oxidoreductase |
0.021 |
| Pfam |
PF07992.9 |
Pyridine nucleotide-disulphide oxidoreductase |
1.8e-62 |
| Pfam |
PF01134.17 |
Glucose inhibited division protein A |
7.2e-05 |
| Pfam |
PF02852.17 |
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain |
1.6e-41 |
| Pfam |
PF01262.16 |
Alanine dehydrogenase/PNT, C-terminal domain |
0.00061 |
| Pfam |
PF12831.2 |
FAD dependent oxidoreductase |
3.7e-08 |
| Pfam |
PF00070.22 |
Pyridine nucleotide-disulphide oxidoreductase |
1.5e-15 |
| Pfam |
PF13450.1 |
NAD(P)-binding Rossmann-like domain |
3e-05 |
| Pfam |
PF05834.7 |
Lycopene cyclase protein |
1.4 |
| Pfam |
PF13434.1 |
L-lysine 6-monooxygenase (NADPH-requiring) |
0.00048 |
| Pfam |
PF00890.19 |
FAD binding domain |
2.6e-05 |
| Pfam |
PF13738.1 |
Pyridine nucleotide-disulphide oxidoreductase |
4.6e-12 |
| Pfam |
PF03486.9 |
HI0933-like protein |
0.0015 |
| Pfam |
PF01946.12 |
Thi4 family |
7.2e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000442399 |
| D. melanogaster |
FBgn0036762 |
| C. quinquefasciatus |
CPIJ013983 |
| B. mori |
BGIBMGA000292-TA |
| N. vitripennis |
NV17106-PA |
| A. aegypti |
AAEL006928 |
| S. invicta |
SI2.2.0_02533 |
| H. sapiens |
ENSP00000390667 |
| M. musculus |
ENSMUSG00000020664 |
| A. gambiae |
AGAP011629 |
| H. sapiens |
ENSP00000387542 |
| P. vanderplanki |
Pv.16225 |
| H. sapiens |
ENSP00000205402 |
| P. vanderplanki |
Pv.09787 |
| A. mellifera |
GB17626-PA |
| P. humanus |
PHUM336850-PA |
| P. vanderplanki |
Pv.14830 |
| T. castaneum |
TC006823 |
| A. mellifera |
GB16546-PA |
| D. plexippus |
DPOGS215921PA |
| H. melpomene |
HMEL007836-PA |
| H. sapiens |
ENSP00000417016 |
| C. quinquefasciatus |
CPIJ019726 |