MidgeBase gene description page [Pn.16371]
Outline
| Gene ID | Pn.16371 |
| Type | Protein coding gene |
| Scaffold | PnScaf37940 |
| Start | 24145 |
| End | 24714 |
| Direction | + |
Sequence
Transcript: 567 (bp)
ATGTTTTTGCTGCATTGCACGTTCAAGCATCTAAAATTTTTCTGTCTGCAGACAGTTCCGGCTCTGGTTGATGGAGACTTTACCATGTTTGACTCAAACGCTATTGCGATTTACTTGACCGAAAAGTATGCGAAAGATGATTCACTCTATCCCAAGGATTTGGAGCGCAGAGCAAAGGTCAACGAACGGCTCTTCTTTGTCGGGAGCTACCTGTTCCCTCGCGGTATCATGATAATCAAAGGTGCACTCAGCGGAGAACTGACCGAACTGCCTCAGAAGTCAATAGACGAGTACCACCGTGGATATGTCACTGTTGAGAGCTTTCTTCAGGATGGAGACTATTTGACAGGCTCTTCACTAACGTTGGCTGATTTATCTTTGTGGTGTATTATGGAATCAGCAGATCAAATCATTCCAGTCGATGAAACACGCTTTCCGAAGTTCTTTAAGTGGCTGCAGCGAATGCGTGAGGAGAATAAATTTTATCAATTAAACAAGGAGGGTGCAGATCTTCATATCGGCATTTTTAAGCAATGCCTTGAGAGAAACCGTGCCAAGGCTCAAAAT
Protein: 189 (aa)
MFLLHCTFKHLKFFCLQTVPALVDGDFTMFDSNAIAIYLTEKYAKDDSLYPKDLERRAKVNERLFFVGSYLFPRGIMIIKGALSGELTELPQKSIDEYHRGYVTVESFLQDGDYLTGSSLTLADLSLWCIMESADQIIPVDETRFPKFFKWLQRMREENKFYQLNKEGADLHIGIFKQCLERNRAKAQN
| Type | Start | End | Length |
| CDS |
24145 |
24711 |
567 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ACP27604 |
glutathione S-transferase [Chironomus tentans] |
2e-33 |
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
2.8e-08 |
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
0.045 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
7.5e-05 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
0.00095 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
3.9e-09 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.01675 |