MidgeBase gene description page [Pn.16340]
Outline
| Gene ID | Pn.16340 |
| Type | Protein coding gene |
| Scaffold | PnScaf37569 |
| Start | 1668 |
| End | 3635 |
| Direction | + |
Sequence
Transcript: 1845 (bp)
ATGAGTCGTGAAGCTTTTTTCTTTCTACCCAAAGATGCTCCATCAACGTTTTCTCGTGACGAAAGCCTCGAGAAATTACCATTGCCAAAATTAGAGGATACTCTGGAGAGATATTACAGAAATTTGCTTCCTTTCGGCGATCATAACGAACTTAAGAATTCTCGAAAAATAATTGAAGAATTCAAGAATGGTGAAGGGAAAAAATTGCACAAGATGTTGGAAGAAAAGGCATCAAAAGAGAAAAATTGGGTTGAGAGATACTGGGAGGATTACGCTTATCACGACTTGAGATTTCCACTGAGTCCATTCACGGTCATGGCTCAACCTCTTATTGTTGCTTCAGTCGGTGTTGAGGAGAGCCCAACAAATCGCATGAAAGCTCTTGCTACAGCTGCTTATTTTTCTGGAAAGTTCTGGGAGCTGATTTACACTGAGCGATTGAGACCGCCGACAAATCCCGATGGAAGTGTAACCTTCTCATCTAACTTGTATAAACGTCTTTACAACACTTGCCGCGTACCTGGTGAAACGAGAGATGAAATTCATGAATACTTCAAAACCAAAGCTGAAGGTGAATGTCCAAAAACACTGCTGGTTGTAGGCAAAGGTCGCGTTTTTATCATGGACTTTGTAGTGAACGACGAAGTTATTTCACCGCAAGACTTTTTATATTCACTTTCGATCATACGTGGCAAACTGCAGAACGAAATGAGCTCTCCTGGCATTCCAATACTGACGTGTGACGAGCGAACTGGCTGGTATAAAAATAGAAAGCATTTGATGGAATTGTCAAAGGACAATGAGAAGCTGTTGAAGCTAGTGGAGTCTGCAGCAATGACTCTTTGCTTGGACGACAACGAGCCGAGAGATTACTCAGAAACTTCTTCCTTCACTCTGAGCGGTGACTATCATTCCCGGTGGCTCGATAAGTCATCAATGATGATTTCGTTTAAAAATGGGAAATTTGGATGCGTTGGTGAACATTCTTCTTATGATGGTACAATTTCCATAGCATTCTCAACTTTTATTCTTATGAGTATGATGGAAGAACCCGAACCAGATTGGGACGTTGAACCGAAGCTAAAAATCATTCCAAAAGAAATTAAATTCAAAATTGACGATCATTTGCGTTCAGAAATTTTACGAGTGGAGGACTTTTTAAGTGGCATTAAAACAGCGGTAACTGTAAAGTGCACTCAGTTCGATTCTTATGGAAAGAAGTTTATGAAAGATCACAAAGTTCATCCAGACTGCTACGTGCAAATGGGACTGCAACTTGCATATTACAAACTTCATAATAAACTAGCACCGACATATGAAACGGCGACTATGAGAGTCTACTATCATGGACGAACAGAAACCGTTCGTTCTTGCTCGATCGAAGTGAAGAACTGGATCGACAAGATGTGCGAAAAAAACATTTCTACCTCAGAGAAAGCTAAATTCTTTAGGGATGCAGCAAATTCCCAATATCAGTTGATGAACGAGGCTCGAAAGGGAAGAGGCTTTGATAGACATCTGTTTGGCTTGTGGTGTATAGCCACAGAAAATAATATTAAAATTCCATCGTTTTACGAAGATCCGCTCTACACGAAATCTGGTGGGGGAGGAAATTTTGTTCTTTCTACTTCAACACTCGGTTATACTATCAATGTGGGTTTTGTTGCGCCGATGGTTCTTGATGGCTATGGGGTATTTTACGCCATGCTGGACGATTGTGTTTGGATGATAACGACTGCATATCGCGACAGCACAATTACTTCAAACAAAAAGTTTTATGACTCTTTTGTTAGTGCAATGATGGAGATTAAAGAGATTCTAGAAAAAACTTCCTCTTCAAAATTG
Protein: 615 (aa)
MSREAFFFLPKDAPSTFSRDESLEKLPLPKLEDTLERYYRNLLPFGDHNELKNSRKIIEEFKNGEGKKLHKMLEEKASKEKNWVERYWEDYAYHDLRFPLSPFTVMAQPLIVASVGVEESPTNRMKALATAAYFSGKFWELIYTERLRPPTNPDGSVTFSSNLYKRLYNTCRVPGETRDEIHEYFKTKAEGECPKTLLVVGKGRVFIMDFVVNDEVISPQDFLYSLSIIRGKLQNEMSSPGIPILTCDERTGWYKNRKHLMELSKDNEKLLKLVESAAMTLCLDDNEPRDYSETSSFTLSGDYHSRWLDKSSMMISFKNGKFGCVGEHSSYDGTISIAFSTFILMSMMEEPEPDWDVEPKLKIIPKEIKFKIDDHLRSEILRVEDFLSGIKTAVTVKCTQFDSYGKKFMKDHKVHPDCYVQMGLQLAYYKLHNKLAPTYETATMRVYYHGRTETVRSCSIEVKNWIDKMCEKNISTSEKAKFFRDAANSQYQLMNEARKGRGFDRHLFGLWCIATENNIKIPSFYEDPLYTKSGGGGNFVLSTSTLGYTINVGFVAPMVLDGYGVFYAMLDDCVWMITTAYRDSTITSNKKFYDSFVSAMMEIKEILEKTSSSKL
| Type | Start | End | Length |
| CDS |
1668 |
1916 |
249 |
| CDS |
1978 |
3153 |
1176 |
| CDS |
3213 |
3632 |
420 |
| intron |
1917 |
1977 |
61 |
| intron |
3154 |
3212 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_312640 |
AGAP002329-PA [Anopheles gambiae str. PEST] gb|EAA07452.4| AGAP002329-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR000542 |
Acyltransferase ChoActase/COT/CPT |
|
| Gene Ontology(MF) |
GO:0016746 |
transferase activity, transferring acyl groups |
|
| Pfam |
PF00755.15 |
Choline/Carnitine o-acyltransferase |
2.8e-144 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000411983 |
| H. sapiens |
ENSP00000331981 |
| P. humanus |
PHUM025470-PA |
| C. quinquefasciatus |
CPIJ005329 |
| P. vanderplanki |
Pv.07902 |
| H. sapiens |
ENSP00000413575 |
| M. musculus |
ENSMUSG00000003623 |
| A. gambiae |
AGAP002329 |
| D. melanogaster |
FBgn0039543 |
| P. vanderplanki |
Pv.07901 |
| P. vanderplanki |
Pv.11877 |
| A. aegypti |
AAEL005169 |