MidgeBase gene description page [Pn.16338]

Outline

Link to gbrowse

Gene ID Pn.16338
Type Protein coding gene
Scaffold PnScaf37550
Start 1838
End 7284
Direction +

Sequence

Transcript: 2352 (bp)

 ATGGCCTGGGGATTCTGGTCAGCGAGTACGGTCTCGGATCGAGGACGTTCGCCGCGACGAGCAACGACAAGTTCCAGTGCAATTTACTACCAAACCCAACCTCAGCAGCAGCAGGCGCCCCCGCAGCCTCCACAACAACAGCAACAACCGCAGCAGCAATATGTAATGACTCAGTGCGCTCAGCAGGACGAAACGGCCAGTTGTCACATGATGCCAATGACCTCCCAACAGCAGCAGTCGAGGCCTCCCTCTCGGCCAGGTACGGCCGCTGCGTCCGTGTGCGGAAGTCCATGTCAAAGCGTGTGCCACAGCCCCACATGCCACAGTCCATCGTGTCAAAGTCAAAGTGGAACAACTGAATCTCCCGAACCTCAGCAATGTCACGACTGCCAAGAGCCTCAGTGTCAATACAATCAGCAGCAGCAACAACAACAGCAGCAGCAGATTCAGCATTCGCATCATCTTCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCCACTCATTTCGCAGGATGCGATTCATATGCCGCACATCCACCAGATTCAATACACATACTCACGTCGCACGTCTTTGGATAGCAATGCAATCGATAATCAGCTGTCGGACATAATTTGCCGCGCCATTCAGCCCTCGATACAGTCCGCGACCAACACGTTGACACGAAACGCGTCGCTGCAGGGCGGTGACATCGGCGACTATGCGGTTCCGCAGGCACACCTGCACCACCACATCATCGCGCCGGCAAAGTCGACGTCGTCGCTGATGCGCTGCGGTTCGTGTCCCGGCTCGACGGGCGTCTCACGCCGCGGCTCCAGCTCCGAGTCGAGTCCGGCGGGCAACGTGAGCGTCATTGCGGGCAGCGACGGCATAAGCATGTGTCGCGCGGGCTCCGGCTACTACACGGACACGACGTCGCACTACGACCGAATGCCGCTGCCCATCCCGATTGTGCCCGTGCCGCCCGTACACATGAGCAATCTGCATTCGGAGGACGAAATAGAGCCAGCATATGCTACAGTGTTTCCGAATACAACCGCAAATTTACCGCAACCTCAACAACAACAGCAGCAGCAGCAGCACCAGCAAATAAGCTATCAAACTGATGATCGAAGCATTTATCGTAGGCAAGAACTCAACGGAAACAACGAGATGCCATCGTACAGCTACCATTGTGACCTGTCCGATTGCAGTCAGAATTACATGTCCGACCAGGAGATCGAGTGTCAGACGCCAATTCAGAAACAATATTCGCTCGACGATTTCGAGCTCATCAAAGTGATTGGCCGGGGAAGCTACGCGAAGGTCCTGATGGTCGAGCTGAAGAAGACGAGACGAATTTACGCCATGAAAGTGATTAAAAAGGCATTAGTAACGGATGACGAGGATATCGATTGGGTGCAAACGGAGAAGCACGTCTTCGAGACGGCATCGAATCATCCCTTTCTCGTCGGCTTACACTCATGCTTTCAGACGCCATCTCGCCTCTTTTTCGTCATCGAGTTCGTTCGCGGTGGTGATTTAATGTTTCACATGCAACGTCAACGAAAGCTTCCCGAAGAGCATGCTCGCTTCTATGCAGCAGAAATTAGCTTAGCGTTGAATTTCTTGCATGAGAAGGGCATAATTTATCGTGATCTCAAGCTCGACAATGTGCTCTTGGATCACGAGGGACACATTAAATTAACGGATTATGGCATGTGCAAGGAGGGCATCGGGCCCGGCGATAAGACATCCACGTTCTGCGGAACGCCCAACTATATCGCGCCGGAGATTCTGAGGGGCGAGGACTACGGCTTCAGCGTCGACTGGTGGGCGCTCGGCGTTCTCCTCTACGAGATGCTGTGCGGTCGCAGTCCCTTCGACATCTCGGGCATCGAGAACACGGAGCCGACATCGAATTTGTGTCAATCAAGGAAGCGCCGGAGCATACATTCGACATCGTTCCTCCAGACGACCGAGGACTTTCTCTTCCAAGTCATTCTCGAGAAGGCAATTCGTATTCCTCGATCATTGAGCGTAAAAGCGGCGGCTGTGCTGAAGGGCTTTCTCAACAAGAACCCCGACGAACGGCTCGGCTGTCAACGCGAAAATGGCTTTCTCGATATTGTCAATCATCAGTTCTTTAAAACAATCGATTGGGAAATGCTGGAGCAGAAGCAGGTTACGCCGCCGTTCCAGCCGCGCCTCGAGAACGAGCGCGATTTGACGAATTTTCCGCCCGAGTTCACGGACGAGCCGGTCCAATTGACGCCGGACGAGGATAGGATCATCGACAAGATAGACCAGTCCGAATTCGAGGGCTTCGAGTACGTCAATCCACTCCTAATGACCTTCGACGACTGTGTC 

Protein: 784 (aa)

 MAWGFWSASTVSDRGRSPRRATTSSSAIYYQTQPQQQQAPPQPPQQQQQPQQQYVMTQCAQQDETASCHMMPMTSQQQQSRPPSRPGTAAASVCGSPCQSVCHSPTCHSPSCQSQSGTTESPEPQQCHDCQEPQCQYNQQQQQQQQQQIQHSHHLQQQQQQQQQQQQPLISQDAIHMPHIHQIQYTYSRRTSLDSNAIDNQLSDIICRAIQPSIQSATNTLTRNASLQGGDIGDYAVPQAHLHHHIIAPAKSTSSLMRCGSCPGSTGVSRRGSSSESSPAGNVSVIAGSDGISMCRAGSGYYTDTTSHYDRMPLPIPIVPVPPVHMSNLHSEDEIEPAYATVFPNTTANLPQPQQQQQQQQHQQISYQTDDRSIYRRQELNGNNEMPSYSYHCDLSDCSQNYMSDQEIECQTPIQKQYSLDDFELIKVIGRGSYAKVLMVELKKTRRIYAMKVIKKALVTDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMFHMQRQRKLPEEHARFYAAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIGPGDKTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLLYEMLCGRSPFDISGIENTEPTSNLCQSRKRRSIHSTSFLQTTEDFLFQVILEKAIRIPRSLSVKAAAVLKGFLNKNPDERLGCQRENGFLDIVNHQFFKTIDWEMLEQKQVTPPFQPRLENERDLTNFPPEFTDEPVQLTPDEDRIIDKIDQSEFEGFEYVNPLLMTFDDCV 
Type Start End Length
CDS 1838 2195 358
CDS 2658 2896 239
CDS 3135 3671 537
CDS 5402 5781 380
CDS 5940 6048 109
CDS 6288 6432 145
CDS 6610 6992 383
CDS 7081 7281 201
intron 2196 2657 462
intron 2897 3134 238
intron 3672 5401 1730
intron 5782 5939 158
intron 6049 6287 239
intron 6433 6609 177
intron 6993 7080 88

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_001662685 protein kinase c zeta and iota isoform [Aedes aegypti] gb|EAT45873.1| protein kinase c zeta and iota isoform [Aedes aegypti] 0.0
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR002290 Serine/threonine- / dual-specificity protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR017892 Protein kinase, C-terminal
InterPro IPR000961 AGC-kinase, C-terminal
InterPro IPR008271 Serine/threonine-protein kinase, active site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR020635 Tyrosine-protein kinase, catalytic domain
Gene Ontology(BP) GO:0006468 protein phosphorylation
Gene Ontology(MF) GO:0004713 protein tyrosine kinase activity
Gene Ontology(MF) GO:0004674 protein serine/threonine kinase activity
Gene Ontology(MF) GO:0005524 ATP binding
Gene Ontology(MF) GO:0004672 protein kinase activity
Gene Ontology(MF) GO:0016772 transferase activity, transferring phosphorus-containing groups
Pfam PF00069.20 Protein kinase domain 1.8e-62
Pfam PF03153.8 Transcription factor IIA, alpha/beta subunit 0.39
Pfam PF01636.18 Phosphotransferase enzyme family 0.11
Pfam PF00433.19 Protein kinase C terminal domain 3.1e-11
Pfam PF07714.12 Protein tyrosine kinase 3.3e-31

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID
Pn.12528

Orthologous genes

Species Gene ID
A. aegypti AAEL002885
S. invicta SI2.2.0_06688
T. castaneum TC005980
P. humanus PHUM529700-PA
P. vanderplanki Pv.02261
H. sapiens ENSP00000424398
H. sapiens ENSP00000383711
H. sapiens ENSP00000295797
P. vanderplanki Pv.02525
H. sapiens ENSP00000426412
A. mellifera GB19525-PA
D. plexippus DPOGS209483PA
C. quinquefasciatus CPIJ013835
H. sapiens ENSP00000383712
D. melanogaster FBgn0261854
H. sapiens ENSP00000367830
N. vitripennis NV14702-PA