MidgeBase gene description page [Pn.16317]
Outline
| Gene ID | Pn.16317 |
| Type | Protein coding gene |
| Scaffold | PnScaf37457 |
| Start | 1722 |
| End | 3361 |
| Direction | + |
Sequence
Transcript: 1518 (bp)
ATGAAAGGATATCTTCCGAATCGAGAACTTCGGTTCTATTTCTGCTTCACAATCATGTTATATCTCGCAATGCTCTACAATGTGCAAGTAATCAGCAACTCAAGTTTGAAAGCATACCGAATCATGAGTGACGGATGGAAGGTGCTCAACAGAAAAGTGGACAATTACGATATCGAGTGGCAAGTTTTCAAAGAGCTCATCGGAAAGTATTGGTACTGGTTTCTCATACATCTTGTGACAGGAGAGATCTTCCGGTTTCTGAAATTCAGAAATGTATCGCTGCTGTATTTCCTCGTTGGATTATCAGCATGTCTAGAGATGTACAATGCTCGCTTATTTGCTGCCTTATTCCTACAGACATTGATAAGTTACGGTGTGAGCAGTGCATTCAAGAAAAAGAGGCATATATGGCTGCTCGCGTCACTATGGCTCGTTATACTCAATTTACTTAAATTCGAAAGTTATTTCTCAATACTCATTGAAGTGCTTAACATTGACGAATCGAAGGTACATGACTTTCTCGTCTTTTTTGCTTGGTGCGTACTCAAGAACACAAGCTTCAATCTCGAGCGAGTGTCAAATGCTAAGGAGAACTCGGAAAAATTCAGTCTGATCAACTGCCTTGGCTACGTCTTCTACATTCCAGCATTCCATTTTGGGCCCTGCATTTTGTACAGCCGATACATGCACATGCTAGATTACACGAACTCGAACAACGAGTACTTTATTGGCAAAAGAATAAAAACGGCGCTAATTCAACTGTCGAGATTGTTCGTTTGGTTCTTGATAACAGAAATTGGCTTGCACTTTTTCTACATCCACTACATTCCGATGAGCGTCGATCTCAGCTCGCTCAACATTTTTGCACTCTTTGGCGTGGGCTTTCTGAGCGGGCAGTTTTTCAACAACAAGTACATCATTCAGTACGGAATACCGATAACTTTGGGGGAATTTGAGCACATTCCCATGCCGAACAAACCGAAATGCATTTGTCGAGTGCATCGATACAGCGACATGTGGAAATGGTTCGATCATGGGCTCTACGAATTTCTCTTCAAATACATCTACACACAACTGACGACGCGCACTTCATCTCTTCCAAGGAAGCTCTTTGCTAGTTTCACCACTTTCTTCTTCATCTACATCTGGCACGGGTTTTTCGACTACGTTCTCATTTGGTCGGCCGCCAACTGCTTTAGCATCGTCATCGAAAAGCTTGTATATGAATATGTCGAAAGTGATAAATTCAAAGCAAAGATTGTGTCGCTGTCCTCCGAAAGCTATTACCACAGACTCAAAGCCTACATCGGTGCGCACATTCTCATACCGGCAATCTTATCGAACTTCTTCTTCTTTGGCGGCATGCACTTCGGCATGGAGTTTGTGAGGCGAACATACACGATGGGAGTGTTCAACTACTTTAAAATTTCTGGTACGATTTTCCTCTTGTATCCTATAGCGGAAGCGATTAAACGGCATGAACAATCAAAGAATAAAAGTGATAAACGAATTATTTAT
Protein: 506 (aa)
MKGYLPNRELRFYFCFTIMLYLAMLYNVQVISNSSLKAYRIMSDGWKVLNRKVDNYDIEWQVFKELIGKYWYWFLIHLVTGEIFRFLKFRNVSLLYFLVGLSACLEMYNARLFAALFLQTLISYGVSSAFKKKRHIWLLASLWLVILNLLKFESYFSILIEVLNIDESKVHDFLVFFAWCVLKNTSFNLERVSNAKENSEKFSLINCLGYVFYIPAFHFGPCILYSRYMHMLDYTNSNNEYFIGKRIKTALIQLSRLFVWFLITEIGLHFFYIHYIPMSVDLSSLNIFALFGVGFLSGQFFNNKYIIQYGIPITLGEFEHIPMPNKPKCICRVHRYSDMWKWFDHGLYEFLFKYIYTQLTTRTSSLPRKLFASFTTFFFIYIWHGFFDYVLIWSAANCFSIVIEKLVYEYVESDKFKAKIVSLSSESYYHRLKAYIGAHILIPAILSNFFFFGGMHFGMEFVRRTYTMGVFNYFKISGTIFLLYPIAEAIKRHEQSKNKSDKRIIY
| Type | Start | End | Length |
| CDS |
1722 |
1821 |
100 |
| CDS |
1881 |
2050 |
170 |
| CDS |
2111 |
3358 |
1248 |
| intron |
1822 |
1880 |
59 |
| intron |
2051 |
2110 |
60 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001651263 |
skinny hedgehog/sightless/rasp [Aedes aegypti] gb|EAT48089.1| skinny hedgehog/sightless/rasp [Aedes aegypti] |
6e-89 |
| InterPro |
IPR004299 |
Membrane bound O-acyl transferase, MBOAT |
|
| Pfam |
PF03062.14 |
MBOAT, membrane-bound O-acyltransferase family |
2.2e-25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ013328 |
| A. aegypti |
AAEL000853 |
| H. sapiens |
ENSP00000442625 |
| H. sapiens |
ENSP00000261458 |
| H. sapiens |
ENSP00000375773 |
| H. sapiens |
ENSP00000308628 |
| S. invicta |
SI2.2.0_01294 |
| H. sapiens |
ENSP00000355977 |
| S. invicta |
SI2.2.0_15091 |
| A. gambiae |
AGAP002602 |
| M. musculus |
ENSMUSG00000037375 |
| H. sapiens |
ENSP00000438468 |
| P. humanus |
PHUM236640-PA |
| A. mellifera |
GB14963-PA |
| T. castaneum |
TC030549 |
| S. invicta |
SI2.2.0_14685 |
| H. sapiens |
ENSP00000444995 |
| H. sapiens |
ENSP00000416845 |
| P. vanderplanki |
Pv.07870 |
| H. melpomene |
HMEL005945-PA |
| D. melanogaster |
FBgn0024194 |
| H. sapiens |
ENSP00000439229 |
| H. sapiens |
ENSP00000355976 |
| N. vitripennis |
NV12751-PA |