MidgeBase gene description page [Pn.16295]
Outline
| Gene ID | Pn.16295 |
| Type | Protein coding gene |
| Scaffold | PnScaf37210 |
| Start | 14678 |
| End | 16590 |
| Direction | + |
Sequence
Transcript: 1563 (bp)
ATGGAATCAGAAAAGTTACTCATGGGTGTAATGGCAGTCGCGGCTGTCGGTGTTACTACATTTGTCTTTTGGCCGTCAAATACAAAATCAAAATTAAGGCAACGCAGAGGACAAGTTTCTGGCTTAATTAATTTTGGTAACACTTGCTTCTTGAATTCCCTTCTACAAGCATTTGCTGCATCTCCTCAATTTTTAACTTGGCTTCAATTACATGATTCACTTGACAAGAAATCGTTAATTTCATCGCTGCAAATCGTTCTCGACTGCGTAAATGGCACTCATTCAACAATTCGCACCGATCCATCGAATCCAGCGAGTGTCATAAGATCTTTAAATAATTTAGGATGGATAATTCCCCAACATGAGCATGACCCTCACGAATTGTTGCACGTAATTTTGTCATCTCTAGAGGAAGAAGCGTTAAAGCCAAAGAAAGTTGGATGCCTATCTGACGCACTTGGCGATATTCAGGCTATCCAGCAGCCTCTTCCAGCTCGGCCTTCGTCTGCAATGCTTACAGAATTCGATAAAGACACATACAATGAGTCGTCAAACCTTTTAAGGCTAGTGCGATCAGAAGCTCAAACTCCCGAGAGCAATCAATCAACAGTGGACGAAAATGAGTCAATAGATCACTCCATGTTTGATGACGACGAAAAGGACAAGTCACTCCAAGACTCTCCACCATCAATAATTTCTTCTACAACTGGTCGACCTCGAAACAGTGCCGGCACTAGTAATTCAACTATTACCGATTCATTTTGCAAACGCAACTGCGGCTCTTATCGCTCCCTCGACAGACTGTCACGAGGGCCTGGCCGAGTTTCAATTTGGAATGATAAATTCACCAAGCAGATTGCAATTCCGTTCAAGGGAAGTATTAGCTCTCAGCTAATTTGCGCAGGCTGCGCTTACAAATCTGTTGTGCGAGTGGACAAATTTGAGTCAATCACTCTCAACTTGCCTGAAGAAAGAAATCAGTCGCTCCTGAGCTTAGGTCAGTTGCTAAGTGATTATGTTGCGCAAGAAACAGTAACGGACGTCGAATGTGATTCGTGCAATCAAATCACCAATCATAATAAAACGATAACATTTACCAAACTACCACCGTGTCTGGCAATTCACATTTCCCGAACAAATTGGTCAAATGGATACGTCTCTAAACGCAATGATTTCGTTCACTTTCCTGAAAGTCTGAGCATGGCTCCTTACTCTTTTATTCAACCATCTCTAAGCCAAACTTCTACTCCTTGGGGAAGCATGATGTCCTTGTACTCGGCGAGTGTCTCAAATATGACCCCGACGAACGAAAACGTCCAATTTGGATCGCCTTTCTCGAATTTCGGAGCTTTCCCACGAAATTTGTACCGATTGTTGGCAGTTATTGTTCATGGTGGCGATGGTGCAAACAATGGTCATTTTATAACATACCGTCGCGGTTCTTTGCGTAATTACCACAAATGGTATCTAACATCTGATCATTTAGTAAAAGAAGTATCCATAGAAGAAGTTCTTTCGTCGCCTGCTTACATGTTATTTTACGACCGTTCAAACAGCCGAAAT
Protein: 521 (aa)
MESEKLLMGVMAVAAVGVTTFVFWPSNTKSKLRQRRGQVSGLINFGNTCFLNSLLQAFAASPQFLTWLQLHDSLDKKSLISSLQIVLDCVNGTHSTIRTDPSNPASVIRSLNNLGWIIPQHEHDPHELLHVILSSLEEEALKPKKVGCLSDALGDIQAIQQPLPARPSSAMLTEFDKDTYNESSNLLRLVRSEAQTPESNQSTVDENESIDHSMFDDDEKDKSLQDSPPSIISSTTGRPRNSAGTSNSTITDSFCKRNCGSYRSLDRLSRGPGRVSIWNDKFTKQIAIPFKGSISSQLICAGCAYKSVVRVDKFESITLNLPEERNQSLLSLGQLLSDYVAQETVTDVECDSCNQITNHNKTITFTKLPPCLAIHISRTNWSNGYVSKRNDFVHFPESLSMAPYSFIQPSLSQTSTPWGSMMSLYSASVSNMTPTNENVQFGSPFSNFGAFPRNLYRLLAVIVHGGDGANNGHFITYRRGSLRNYHKWYLTSDHLVKEVSIEEVLSSPAYMLFYDRSNSRN
| Type | Start | End | Length |
| CDS |
14678 |
14702 |
25 |
| CDS |
14841 |
14913 |
73 |
| CDS |
14993 |
16010 |
1018 |
| CDS |
16077 |
16194 |
118 |
| CDS |
16259 |
16587 |
329 |
| intron |
14703 |
14840 |
138 |
| intron |
14914 |
14992 |
79 |
| intron |
16011 |
16076 |
66 |
| intron |
16195 |
16258 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001662730 |
ubiquitin-specific protease [Aedes aegypti] gb|EAT35219.1| ubiquitin-specific protease [Aedes aegypti] |
1e-164 |
| InterPro |
IPR018200 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
|
| InterPro |
IPR001394 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
|
| Gene Ontology(BP) |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
|
| Gene Ontology(MF) |
GO:0004221 |
ubiquitin thiolesterase activity |
|
| Pfam |
PF00443.24 |
Ubiquitin carboxyl-terminal hydrolase |
2.1e-47 |
| Pfam |
PF13423.1 |
Ubiquitin carboxyl-terminal hydrolase |
2.1e-25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000376535 |
| D. melanogaster |
FBgn0029819 |
| D. plexippus |
DPOGS205709PA |
| A. mellifera |
GB17074-PA |
| M. musculus |
ENSMUSG00000029592 |
| H. sapiens |
ENSP00000443678 |
| P. vanderplanki |
Pv.08311 |
| H. melpomene |
HMEL014808-PA |
| H. sapiens |
ENSP00000257548 |
| S. invicta |
SI2.2.0_02608 |
| P. humanus |
PHUM233650-PA |
| A. gambiae |
AGAP000269 |
| B. mori |
BGIBMGA009920-TA |
| N. vitripennis |
NV11851-PA |
| A. aegypti |
AAEL012593 |
| T. castaneum |
TC002215 |