MidgeBase gene description page [Pn.16283]
Outline
| Gene ID | Pn.16283 |
| Type | Protein coding gene |
| Scaffold | PnScaf37122 |
| Start | 19154 |
| End | 24516 |
| Direction | - |
Sequence
Transcript: 378 (bp)
ATGAGTCGGGCGATAGCAGTGAATAACAAGAGTGTCGGCTGCGCACTTCGCACGAGAGCCAAGAAGCAGAGGGCGGCGAGGAAGCACAATATATCAGATCTAACAGCTGGTGGTAGTATAATTGAAAATATAGCGCAAACAAAGAGATTAGCGGAGACGACAATGGATGGCAGCAGCAAGAGCTCCAAAATTATTCCCGAAGAGGAGCGGCCGACCAATACGGGCTCGGGATCAAACGACGAGGACGAGGAGAATGCGGGAGTAAATAAGAGCATGCACCAAGACTTTCGCACCAACAACCGACTTGCGACATTTTCCTTCTTCCTCGCTTGCTCTCGCTCCGAATTCAAATGTCCCGTGTCCTTCGGACGTCAAATT
Protein: 126 (aa)
MSRAIAVNNKSVGCALRTRAKKQRAARKHNISDLTAGGSIIENIAQTKRLAETTMDGSSKSSKIIPEEERPTNTGSGSNDEDEENAGVNKSMHQDFRTNNRLATFSFFLACSRSEFKCPVSFGRQI
| Type | Start | End | Length |
| CDS |
19157 |
19274 |
118 |
| CDS |
19804 |
20021 |
218 |
| CDS |
24475 |
24516 |
42 |
| intron |
19275 |
19803 |
529 |
| intron |
20022 |
24474 |
4453 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_003436820 |
AGAP004453-PC [Anopheles gambiae str. PEST] gb|EGK97179.1| AGAP004453-PC [Anopheles gambiae str. PEST] |
4e-26 |
| Pfam |
PF02762.9 |
CBL proto-oncogene N-terminus, SH2-like domain |
0.14 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes