MidgeBase gene description page [Pn.16097]
Outline
| Gene ID | Pn.16097 |
| Type | Protein coding gene |
| Scaffold | PnScaf35654 |
| Start | 35389 |
| End | 36873 |
| Direction | - |
Sequence
Transcript: 1350 (bp)
ATGCCAAAGCTAAGGTTTAAATGGATATTCCTGATAATTTACGTGTTAATCTCTTTCGGCTTGTTTGAAAAAGTGTACCAGACATCAAAATCAGTCATCGATGAACTATTCCACATCGACCAGGGTCTAACTTACTGCTATGGCTTTTATCGAAAGTGGAACCCGAAAATAACAACCTTGCCCGGTCTGTATCTGCTAACAATTTTCCTGCCACGATGCTCTGTCTACACACTTCGGCTGATCCCTCTGGTGTGCTCAGTCATCAATTTCTGGCTGATAATGAACATTCGCGAAATGATTGCGAGCAAAACAAGGGACAAGGACAGCCGCAAAATGAATTTGCTCCTTGATTCTCTATCGATTGCCATCCTGCCTCCGATGTACTTCTTCTCATTTATCTACTACAGTGACATTCCGTCAATCACCACTATTCTTCTAACGATTCTCTGCTCGATGAAGGAGAGACACACAATTGGTGCCGTCTTCGGACTTTTCTCGGTTCTCATGCGTCAAACAAATATTGTTTGGGTAGCAGCGGTGCTCGGAGCAGCAGCAGTCGACTGCGCAATCAAGAAAACCTTTCCGAGACTAAATTCGAGGGAGTCATCTGTTGAGCACTTGATTGCTGCTATAAAACAACACCTCCTTCGACCTAAAATGATTTTTGAGTTGATTCTGGAAGTTTTCAGAAAATTCTTTGGGTACATTGCGGTGATTGTTGCGTTTATGATTTTCCTCTACGTCAACGGGTCGATAGTCGTTGGTGACAAGCATGCACACGAGGCCACAATCCACTTACCTCAAATGCTGTACTTTTCTCTCTTCACGCTCATTTTCGGGTCGTCAATGTGGATTCCAAATTTGAAGAGGTTCATAAGTCATCTCTTCTGCATCAGAAACCTACTAATTGCATTGGTTGTGCTCATCATTTTGGCAGCCATTATTCGTTACAACACAATCGTTCATCCTTATTTGCTCGCCGATAATCGTCATTTTACATTTTATGTTTGGAACAGATTTTATGCGAGAAATCAGTTCTTCCGATACCTTGTGATTCCCGCATACATTTTTGGTCTTTACATAGTTCAGAAGGCACTCAATGGCTCAATCGGATTCAAGATTTTCTTTGTGATTTCGAGCTTTCTTACTCTCTGCCTGCAATCGCTCATTGAAGTGCGCTACTTTCTTATTCCATTTCTGATATTAAGGCTTCATGTTCAAGATATTAAAACGCGTTGGACACTTGTTGAGTTATTTTTAAATATTTTATTAAACATTTTGGCATTCAAAGTATTCTTTTCAATTGAAACGAAATGGTCTGATTACGAAGAACCACAGCGCATCATGTGG
Protein: 450 (aa)
MPKLRFKWIFLIIYVLISFGLFEKVYQTSKSVIDELFHIDQGLTYCYGFYRKWNPKITTLPGLYLLTIFLPRCSVYTLRLIPLVCSVINFWLIMNIREMIASKTRDKDSRKMNLLLDSLSIAILPPMYFFSFIYYSDIPSITTILLTILCSMKERHTIGAVFGLFSVLMRQTNIVWVAAVLGAAAVDCAIKKTFPRLNSRESSVEHLIAAIKQHLLRPKMIFELILEVFRKFFGYIAVIVAFMIFLYVNGSIVVGDKHAHEATIHLPQMLYFSLFTLIFGSSMWIPNLKRFISHLFCIRNLLIALVVLIILAAIIRYNTIVHPYLLADNRHFTFYVWNRFYARNQFFRYLVIPAYIFGLYIVQKALNGSIGFKIFFVISSFLTLCLQSLIEVRYFLIPFLILRLHVQDIKTRWTLVELFLNILLNILAFKVFFSIETKWSDYEEPQRIMW
| Type | Start | End | Length |
| CDS |
35392 |
35981 |
590 |
| CDS |
36053 |
36656 |
604 |
| CDS |
36718 |
36873 |
156 |
| intron |
35982 |
36052 |
71 |
| intron |
36657 |
36717 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_312525 |
AGAP002420-PA [Anopheles gambiae str. PEST] gb|EAA07509.4| AGAP002420-PA [Anopheles gambiae str. PEST] |
1e-101 |
| InterPro |
IPR007006 |
Glycosyltransferase, ALG10 |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0016758 |
transferase activity, transferring hexosyl groups |
|
| Pfam |
PF02656.10 |
Domain of unknown function (DUF202) |
1.6 |
| Pfam |
PF04922.7 |
DIE2/ALG10 family |
3.5e-86 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP002420 |
| T. castaneum |
TC014238 |
| P. humanus |
PHUM022240-PA |
| A. aegypti |
AAEL007809 |
| C. quinquefasciatus |
CPIJ009479 |
| H. melpomene |
HMEL014229-PA |
| H. sapiens |
ENSP00000266483 |
| S. invicta |
SI2.2.0_14916 |
| P. vanderplanki |
Pv.05152 |
| N. vitripennis |
NV16209-PA |
| B. mori |
BGIBMGA009609-TA |
| H. sapiens |
ENSP00000310120 |
| D. plexippus |
DPOGS215114PA |
| A. mellifera |
GB18199-PA |
| D. melanogaster |
FBgn0052076 |
| M. musculus |
ENSMUSG00000075470 |