MidgeBase gene description page [Pn.15903]
Outline
| Gene ID | Pn.15903 |
| Type | Protein coding gene |
| Scaffold | PnScaf33993 |
| Start | 14240 |
| End | 15173 |
| Direction | + |
Sequence
Transcript: 639 (bp)
ATGGACGTGAAAAGGGAGAGCTGTCAGAAAGTTTTGCTGAGACTTGTAGTTTTTGTTGTTGCTTTGCTATCATCATCAATAAATCACGCTTCAGCACAAAACCATAGCGATAAATTACAAGTTGACATTCTGTACGAGTCACGATGCCCCGATTCGCGTAACTTCATGCAATACCAGCTGAAACGTGCATACCCGAAAATAAAGGACAAAGTTTTTTTGAACTATGTACCGTTCGGCAAAGCGTATAGCTACGACTCGAATGGCGGCGAAAAGAGGTTTAGCTGTCAGCACGGTGCACGAGAGTGCAACGGAAATCTCTATCAGTCGTGCGTGCTCGATGCAATCGGAGCAGAACGCCAGGATGCACAGACAAGTTTCGTCATTTGTGCGATGGATTTTTCAAAGAATCCCTCGCATTGCGCACAAAACCTCGGCGTTGACCCAAATCAGGTGAATGAGTGCACGCATGGCGAGCGGGGCATTGAATTGCAGCTGCAAGCTGAGAAGCAGTCGAAAGCATTCATCCAGCGATCGTCGTTTGTTCCGACTATTATTTATAACAACGCTTACAATGCAGCCGACTTTTGGGAGTCGCTCGATGACTTTGAGGGAATCGTTCAGGGCAAGTTGAGGAATCTG
Protein: 213 (aa)
MDVKRESCQKVLLRLVVFVVALLSSSINHASAQNHSDKLQVDILYESRCPDSRNFMQYQLKRAYPKIKDKVFLNYVPFGKAYSYDSNGGEKRFSCQHGARECNGNLYQSCVLDAIGAERQDAQTSFVICAMDFSKNPSHCAQNLGVDPNQVNECTHGERGIELQLQAEKQSKAFIQRSSFVPTIIYNNAYNAADFWESLDDFEGIVQGKLRNL
| Type | Start | End | Length |
| CDS |
14240 |
14353 |
114 |
| CDS |
14501 |
14632 |
132 |
| CDS |
14717 |
15019 |
303 |
| CDS |
15081 |
15170 |
90 |
| intron |
14354 |
14500 |
147 |
| intron |
14633 |
14716 |
84 |
| intron |
15020 |
15080 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADD18820 |
gamma-interferon inducible lysosomal thiol reductase [Glossina morsitans morsitans] |
7e-28 |
| InterPro |
IPR004911 |
Gamma interferon inducible lysosomal thiol reductase GILT |
|
| Pfam |
PF03227.11 |
Gamma interferon inducible lysosomal thiol reductase (GILT) |
2.8e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.10429 |
| Pn.15902 |
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0037721 |
| C. quinquefasciatus |
CPIJ007524 |
| H. melpomene |
HMEL004402-PA |
| P. humanus |
PHUM617050-PA |
| C. quinquefasciatus |
CPIJ002339 |
| P. vanderplanki |
Pv.05343 |
| T. castaneum |
TC007331 |
| D. plexippus |
DPOGS211362PA |
| P. vanderplanki |
Pv.05344 |
| C. quinquefasciatus |
CPIJ002338 |
| B. mori |
BGIBMGA008360-TA |
| A. gambiae |
AGAP002989 |
| C. quinquefasciatus |
CPIJ007525 |