MidgeBase gene description page [Pn.15850]
Outline
| Gene ID | Pn.15850 |
| Type | Protein coding gene |
| Scaffold | PnScaf33600 |
| Start | 160 |
| End | 741 |
| Direction | + |
Sequence
Transcript: 579 (bp)
ATGGCAAAGAATGTCGGTCCACAAGACGCTAAGGCGGCCATCGAGCTCGTTCAATTTGCATACTTCAAAAAAGTCCTCGAAAAGGAAAAGAAGCAAAAGCGTAAGCGTGGCGAAGATGACGGAGAGGAATCGGATGCTTCGGATGAAGAAGAGACGCATCACGCTACAAATTCGTCAAATGCGAGAAGTGCAGCGAAAAAGAGCAAAATTGTTCACTATGCGACAGACGATGAGGACGAGGAAACAATTGTCACAATGCACACAGACACCAACGATATTACCGCGCGCGAGTCAATCACTACACCTCGCACGAGCTCACAACAGCCATCATCTTCGGGTACAGAGAGCGAGCCGATGGTTGAAGCAATTACCGATGCTCGTCTTGGCGTCTTCAAAAATGGTCTCCAGAAAGTATTCCGTGAATCTCGCGACTCGAGCTTGCCAGTCGATAGAATTGTTAATTACATCAATCAGAATAGCGGCGATGAAGCTTTCAGTCAGGGAGAAATTAAGTCTGCACTGGAGCGCATGACAAACGACAATCAAATCATGGTGGCCGACGATATTGTCTTCTTGATT
Protein: 193 (aa)
MAKNVGPQDAKAAIELVQFAYFKKVLEKEKKQKRKRGEDDGEESDASDEEETHHATNSSNARSAAKKSKIVHYATDDEDEETIVTMHTDTNDITARESITTPRTSSQQPSSSGTESEPMVEAITDARLGVFKNGLQKVFRESRDSSLPVDRIVNYINQNSGDEAFSQGEIKSALERMTNDNQIMVADDIVFLI
| Type | Start | End | Length |
| CDS |
160 |
738 |
579 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001862552 |
DNA replication licensing factor MCM3 [Culex quinquefasciatus] gb|EDS37190.1| DNA replication licensing factor MCM3 [Culex quinquefasciatus] |
7e-41 |
| Pfam |
PF00242.12 |
DNA polymerase (viral) N-terminal domain |
0.068 |
| Pfam |
PF04720.7 |
Protein of unknown function (DUF506) |
0.25 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes