MidgeBase gene description page [Pn.15782]
Outline
| Gene ID | Pn.15782 |
| Type | Protein coding gene |
| Scaffold | PnScaf33068 |
| Start | 13968 |
| End | 15640 |
| Direction | + |
Sequence
Transcript: 1413 (bp)
ATGGGACGACGATCGATTAATACCACCAAGAGTGGAAAATACATGAATCCAACAGATCAAGCGAGAAAGGAGGCTCGCAAGAAAGAACTAAAGAAAAACAAGAAACAGAGACAGATGGTAAGGCAGGCAGTTCTCAAAAACAAAGATCCAAGTCAGCTTCTCGAAGAAATGGAAAAGATTGATGAAATGGAGTACAACGTACTGCAGCCATCGCCGCTAAATGAAAAAGTTCTCAAAGAAAAAAGGAAAAAGTTGAAAGAGACATTCGACAGAGTGATGAGGTTGCTGCACGAAGAAGAACTCGAACAGTGGCAGGAGATAAAGCGAAAAGAGGTCGAATACGAGAAACGAAAATACAAAAGAGTCCACTATTATGAGAGTGTACGGCATGCAGAACAAGTATCTATTGAGGACATTCCTCTTCCGTCCTCGACAAGTGACAAACCGATACCGGCTACGATTCCCAAAATCAACCTTCCACCTCCCATCCTCCTCACAAATGTACCACCGCCGACCACATTAAAGAAATTAGAGGACGATACGGCGCAAGAAAATAAGGAAAAGGAACCGCCAGGCGTCCCAGCTTCAATGCCTCCCAACTTGTTCGACATGCGAGAGCTAGATTCAGATTACGAGAGCGAACACGAACAAGTCGAAGAGGAGGAAGAAGTGGCCACAAAGGACGATTTACCGAAAGATAAACACGACAAGAACATCGAAGAATTCATGCGAGAAGTAGAGTCGGTACAGAAGAAGGAAGAAGAGCGCGCGCTGGAAATGCGAATCGATCCCACGCCGGATGTCGAACTGGAGGAGAAATCTGACGAAGTCGAATTTTCGGAGGAAGAACCGTCTCAGCAAGACCCTCAAGTGTCTGTTCAAGAATTGGAGATTACTAAAACTGCACCCGAAGCATTGCCAATTCCGTCGATTCCTCCGATGGCGGCTCTGCCGAGAATGCCGCCTCATCCACATCCACTCATCTTTCGGCCGCCACCGATGCGCGCAGGCGTCCAAATGGGAATCCGCATGCCACCTGGTCCACCGCCAGGTCCTCGGCCCAACATGGGAATGCCGCGAATGGGAATAAGAATGCCGCCAGGTCCTCCAATGGGTCCGCCACCTATGCGCCACAAAGGCATGCACCACGACCGAGGCATGCCGCCACAGCAAAAGCAATCGACAACAACAATCACGGCAAAGCCTCAAATCAGAAACTTGTCTGCAGACGTTACACGCTTTGTGCCAACGACCTTGAGAACGAAGCGCGATGAGCCGAAGAAAGTGAAACCTAAGTCATACATCCCCGAGACTCAGATGCAACAAGTAGCCATGCAACAACAACACCAGCAGCAGAAGCCAACAAAAGACGATGCCTATCTTCAATTCATGAACGAGCTCCAAGACTTATTG
Protein: 471 (aa)
MGRRSINTTKSGKYMNPTDQARKEARKKELKKNKKQRQMVRQAVLKNKDPSQLLEEMEKIDEMEYNVLQPSPLNEKVLKEKRKKLKETFDRVMRLLHEEELEQWQEIKRKEVEYEKRKYKRVHYYESVRHAEQVSIEDIPLPSSTSDKPIPATIPKINLPPPILLTNVPPPTTLKKLEDDTAQENKEKEPPGVPASMPPNLFDMRELDSDYESEHEQVEEEEEVATKDDLPKDKHDKNIEEFMREVESVQKKEEERALEMRIDPTPDVELEEKSDEVEFSEEEPSQQDPQVSVQELEITKTAPEALPIPSIPPMAALPRMPPHPHPLIFRPPPMRAGVQMGIRMPPGPPPGPRPNMGMPRMGIRMPPGPPMGPPPMRHKGMHHDRGMPPQQKQSTTTITAKPQIRNLSADVTRFVPTTLRTKRDEPKKVKPKSYIPETQMQQVAMQQQHQQQKPTKDDAYLQFMNELQDLL
| Type | Start | End | Length |
| CDS |
13968 |
14031 |
64 |
| CDS |
14103 |
14228 |
126 |
| CDS |
14290 |
15138 |
849 |
| CDS |
15197 |
15259 |
63 |
| CDS |
15327 |
15637 |
311 |
| intron |
14032 |
14102 |
71 |
| intron |
14229 |
14289 |
61 |
| intron |
15139 |
15196 |
58 |
| intron |
15260 |
15326 |
67 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_570023 |
CG2685 [Drosophila melanogaster] emb|CAA19643.1| EG:100G10.1 [Drosophila melanogaster] gb|AAF45812.1| CG2685 [Drosophila melanogaster] gb|ADY17747.1| LD47334p [Drosophila melanogaster] |
2e-84 |
| InterPro |
IPR019007 |
WW domain binding protein 11 |
|
| Gene Ontology(BP) |
GO:0006396 |
RNA processing |
|
| Pfam |
PF09429.5 |
WW domain binding protein 11 |
1.8e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000261167 |
| S. invicta |
SI2.2.0_09811 |
| A. gambiae |
AGAP013760 |
| T. castaneum |
TC000057 |
| H. sapiens |
ENSP00000443420 |
| D. melanogaster |
FBgn0024998 |
| M. musculus |
ENSMUSG00000030216 |
| P. vanderplanki |
Pv.14406 |
| A. aegypti |
AAEL001971 |
| C. quinquefasciatus |
CPIJ801595 |
| B. mori |
BGIBMGA012034-TA |
| H. sapiens |
ENSP00000442868 |
| D. plexippus |
DPOGS207304PA |
| P. humanus |
PHUM414900-PA |
| N. vitripennis |
NV18558-PA |
| H. melpomene |
HMEL007366-PA |
| A. mellifera |
GB12392-PA |