MidgeBase gene description page [Pn.15761]
Outline
| Gene ID | Pn.15761 |
| Type | Protein coding gene |
| Scaffold | PnScaf33020 |
| Start | 17260 |
| End | 18461 |
| Direction | - |
Sequence
Transcript: 792 (bp)
ATGGCAGTTCTCAACCGAATTTTGAGACGCCTTATTTCATCCAACATTATTAACAATTTTACAATAAGAATGGCCTCATTCTCAGCTAATAACAAGCAACCGTACACAGTTTTCGTAGAGGGAAATATCGGCAGCGGAAAGACGACCTTTCTGAATCATTTTCGTCAATTTCAGAATGTTTGCCTTATGACTGAGCCAGTAGAACAATGGCGAAATCTGAACGGCGTCAATCTGTTCGATCTAATGTATAGAAACCCACAGCAATGGGCTATGACCTTTCAAAACTATGTGACTCTTACGATGCTAAAAAACCATATTAAGGTGACTGATCGACCAGTGAAGCTTATGGAGCGCTCAATGTACAGTGCACGCTACTGCTTCGTGGAGAAAATGCTGTCTAGCGGTATACTGCAAGAGGGAATGTATCATGTTCTACAGGAGTGGTACAATTTCATTCACGAACATCATCAAATTCAATGTGATCTCATAGTTTACTTGAGAACTGACCCGGAAATTGTCTACGAGCGAATGAAAAAGCGTGGACGAATTGAAGAGAGCGGTGTCTCTTTCGAATATTTAAAGGACTTGCACGAGTTACATGAAAACTGGCTTATTCATGGCAAATACTATCGGCCCGCTCAAGTCCTTGTGCTCGATGCAAACTTGGATTTGGAGAACATTGGTGCAGAATATGTACGATCGGAAGACAGCATTTTGCGACCAATTGTGATTGAGAACACCAATCAGATGAGCATTACTGCGTCTCCTAGTAAACGAGAACGTGACCTATAT
Protein: 264 (aa)
MAVLNRILRRLISSNIINNFTIRMASFSANNKQPYTVFVEGNIGSGKTTFLNHFRQFQNVCLMTEPVEQWRNLNGVNLFDLMYRNPQQWAMTFQNYVTLTMLKNHIKVTDRPVKLMERSMYSARYCFVEKMLSSGILQEGMYHVLQEWYNFIHEHHQIQCDLIVYLRTDPEIVYERMKKRGRIEESGVSFEYLKDLHELHENWLIHGKYYRPAQVLVLDANLDLENIGAEYVRSEDSILRPIVIENTNQMSITASPSKRERDLY
| Type | Start | End | Length |
| CDS |
17263 |
17832 |
570 |
| CDS |
17898 |
18094 |
197 |
| CDS |
18437 |
18461 |
25 |
| intron |
17833 |
17897 |
65 |
| intron |
18095 |
18436 |
342 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001657342 |
thymidine kinase [Aedes aegypti] gb|EAT33669.1| thymidine kinase [Aedes aegypti] |
3e-93 |
| InterPro |
IPR002624 |
Deoxynucleoside kinase |
|
| Gene Ontology(BP) |
GO:0006139 |
nucleobase-containing compound metabolic process |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0016773 |
phosphotransferase activity, alcohol group as acceptor |
|
| Pfam |
PF13671.1 |
AAA domain |
2.7e-05 |
| Pfam |
PF13555.1 |
P-loop containing region of AAA domain |
0.17 |
| Pfam |
PF13207.1 |
AAA domain |
0.00042 |
| Pfam |
PF05729.7 |
NACHT domain |
0.0024 |
| Pfam |
PF00503.15 |
G-protein alpha subunit |
0.0064 |
| Pfam |
PF01121.15 |
Dephospho-CoA kinase |
0.13 |
| Pfam |
PF07693.9 |
KAP family P-loop domain |
0.0048 |
| Pfam |
PF01712.14 |
Deoxynucleoside kinase |
5.9e-27 |
| Pfam |
PF02367.12 |
Uncharacterised P-loop hydrolase UPF0079 |
0.1 |
| Pfam |
PF00437.15 |
Type II/IV secretion system protein |
0.1 |
| Pfam |
PF13238.1 |
AAA domain |
1.6e-07 |
| Pfam |
PF05049.8 |
Interferon-inducible GTPase (IIGP) |
0.029 |
| Pfam |
PF00406.17 |
Adenylate kinase |
0.029 |
| Pfam |
PF02492.14 |
CobW/HypB/UreG, nucleotide-binding domain |
0.031 |
| Pfam |
PF13401.1 |
AAA domain |
0.026 |
| Pfam |
PF13191.1 |
AAA ATPase domain |
0.028 |
| Pfam |
PF02223.12 |
Thymidylate kinase |
3.5e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000438143 |
| T. castaneum |
TC010791 |
| A. mellifera |
GB14869-PA |
| D. melanogaster |
FBgn0022338 |
| S. invicta |
SI2.2.0_15235 |
| H. sapiens |
ENSP00000435312 |
| H. sapiens |
ENSP00000414334 |
| H. melpomene |
HMEL009059-PA |
| H. sapiens |
ENSP00000299697 |
| H. sapiens |
ENSP00000440898 |
| P. humanus |
PHUM399920-PA |
| H. sapiens |
ENSP00000455187 |
| T. castaneum |
TC003337 |
| C. quinquefasciatus |
CPIJ003276 |
| H. sapiens |
ENSP00000407469 |
| M. musculus |
ENSMUSG00000035824 |
| A. aegypti |
AAEL014055 |
| A. gambiae |
AGAP001585 |
| D. plexippus |
DPOGS201543PA |
| P. vanderplanki |
Pv.05373 |
| B. mori |
BGIBMGA002721-TA |