MidgeBase gene description page [Pn.15749]
Outline
| Gene ID | Pn.15749 |
| Type | Protein coding gene |
| Scaffold | PnScaf32909 |
| Start | 8233 |
| End | 9021 |
| Direction | - |
Sequence
Transcript: 723 (bp)
ATGTCGAGCTCCTTTAAGCTCTTCTACGACTACTTTTCGCCACTCTCGCGCGCTCTTCTCATCCTCTTCGAGCGCAACAACGTCAAGTGCGAGAAGATCGCAGTCGCCCTCAGAAAAGGCGAGCATCTCAGCGAGGACTTTGCGGGCGACGTGAATCGCTTCCAGCGCGTTCCGGTCATTCACGACTCGGACGGCTTCCGATTGGCCGAATCTGTCGCGATTTTTCACTACTTGGGCCGGCGCGGCTATTTCGACGAGCGCTGGTACCCGAAAAGTGACTTCAAAAGGCTCGCACGCCTCGACGAGTTCCTGCAGTGGAACCACAACTCCTTGCTCTTCTCGACCGCGCTCATCTTCTACGAGGCGTGGCTCAAGCCGATTCGCGAGGATTGCATCGTCGAGCACGGCATGATGAGAAGCGTCCGTGAGCCGCTGACCTACGTCGACATCCACGACTCGCTCGAGCGTCTCGAGAATGTGTGGCTGAAAAGCGGCCGCTTTCTTGTCGCTGGCGATGACGGGCCGTCGTTTGCGGAACTCATTTCGAGCTGCGCACTCATGCAGGTCATCGGTCTGCGGCTTTTCGCGCTGGACGGGCAAAAGTACCCGCGAGTGGCGCAGTGGCTGAGCGAGACGAAGAGCTTCTTTAATCCCGAGTTCGACGAGTGCCACAAGTTTGTACACATGTACGGCGAAGCGCTGCAGGGACGGAGTCCGTTTGCG
Protein: 241 (aa)
MSSSFKLFYDYFSPLSRALLILFERNNVKCEKIAVALRKGEHLSEDFAGDVNRFQRVPVIHDSDGFRLAESVAIFHYLGRRGYFDERWYPKSDFKRLARLDEFLQWNHNSLLFSTALIFYEAWLKPIREDCIVEHGMMRSVREPLTYVDIHDSLERLENVWLKSGRFLVAGDDGPSFAELISSCALMQVIGLRLFALDGQKYPRVAQWLSETKSFFNPEFDECHKFVHMYGEALQGRSPFA
| Type | Start | End | Length |
| CDS |
8236 |
8840 |
605 |
| CDS |
8904 |
9021 |
118 |
| intron |
8841 |
8903 |
63 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NP_001162808 |
CG1702, isoform B [Drosophila melanogaster] gb|ACZ95341.1| CG1702, isoform B [Drosophila melanogaster] |
2e-36 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
0.00012 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
2.6e-08 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
2.3e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.03204 |