MidgeBase gene description page [Pn.15689]
Outline
| Gene ID | Pn.15689 |
| Type | Protein coding gene |
| Scaffold | PnScaf32298 |
| Start | 5892 |
| End | 11601 |
| Direction | - |
Sequence
Transcript: 1941 (bp)
ATGCAACTGCCATTGACAACAGAAAGTGATTCCATGGAGGAGATGAAAGTAAAACCCGAAAGTCCATCAAAAACACAAGTTCCTGACAAAGAAAACCAAACAAACAATGATTCAGAAGTAATTCTAAGGCGGACACAAAGTTTTGAAAATGACGAGAAATTTTATCAAAAATACATCGAATTGCGTGCACGCATTAAAGCAAACTCATGTCCAGCACTGCCGGCAACTCCGATTTCAATTGCAAAAGACGATAGTGATAAGGAAAGTACTACTAAGCCTACGACGAATTTTATTATTCAACGATCGGCGTCATTAAAGGATCGAATTCAACTAAGCAAAAAGATTAATGAGAAAACTCCACCGACCAGTCCAACGCCGACAACACCCACGACACCTGCATCGACGCCTTCAGGACAACTCAGAAGTTACGAGAAACCAACACCAAAACAAGAGTCGGCAATAGGAGCTTTGGCATCAGCCAATCAAAATATAATTGATTTAATTGCGCGTCGCTATAGTGCACCCGTTGAGCCACCAAATAATGGTGTGTCTAATTCGAGTGTTCGCAATAACTCTGTTTCTGATGTTTCAATTAAAATGCCCGAGAAACAAGCAAACGCCTCACAAAATCAACCGAACACACCACAAACACCAACAAGTCCATCCACAATGCTCAATAAATTATCACCAGGGAATATTTTCAAAAATATTTTCAAATCATTTGTGCCTCCGACACGTGATGAGGAGAGTGAGACTCAGAGAAAAGCTCACGCAAAGAGAGTTCGCGAAACAAGACGATCAACTCAGGGTGTAACATTGGATGAAATTAAGAGTGCCGAGCAATTGGTGAAAATGAAGAATGCCAACAATAACAATAGTAATGGCAATACGGAAAACTCGAACAATGAACAAGCAACTGAAAGGCTATCCGAATCGACAATCAACGCACCCGAAACTTCGGTAAAGGAAGATGAAGTTAATGTTAATTACACGATTAGTTCCCCGCTAAGAAAAACATCGAGAACGAGCGTAGACCAAAATGATGAGGATGGCGAACAAAAAATTTCTGCAACTTTCACCATTGCACCTCCGTCACGATCGAATGCCAATTCAGTTGGCCAACTCGCGAATCAGTTAGAAAAGAGTTTAGATCTCGAAACTGATGTTACAGCAACAATCAATGTGCCTCTCTTGTCATCATCAAAAAGCAACAGTGGAGATAGTGATAGAATTAAAAAGACTGATCACCCAAGTCCTCCTCTCCCTCCCGTTCCGCAACCGCGATCCTTATTTGATCTTGATAATGCTACGTCAATAAAGCTCGCTGACAAACTGCAGCAAGAAGCCAAGAAATGTGATGTTAATGCAGTAAGTGAAGAATCTTCGTCGCCCTTAAGTCACATTACGGAACCTCTTCCGCCTTCTCCAATACATCATACGATATTCGGTGAACGAAGACCTTCTTGGCGATTGAAAAGCGACTTCAACAATAAGTTCAAACTGGAGGACGCATCACAATCTACGTCGGTGTCGAATTCGTCACAGCAAACACCGCCGACTACAACAACCAACGGCTTAATACAAGATGCCACTAAAACGACTGTAGTAAACACATCAACACAACGACAAAGTGCTTCGGAAAATTCAGTTCCTAATGATTCAAATTCGGTAGTTCCAAAAGAGACCCCAGTGACACCAAATCGATCGGATGACGACAAAGAAAATGACAAAGAAAACGATAGCCGAGGGGGATTGGCAATACACCGAAGAAGGCGCCCGAAGAGAAGATCCACAGGAGTGGTGCATGTAGATATGGAGGACATTGATCCTGAACATCGTCAAGAGTCGCCCGCCGACGAGAATAATAAGGATGCGATGGAGAATCGATCTCGTGATATACGCTACAACCGGATAAAAATGTTCCAGTTGAAGATTCGAAAA
Protein: 647 (aa)
MQLPLTTESDSMEEMKVKPESPSKTQVPDKENQTNNDSEVILRRTQSFENDEKFYQKYIELRARIKANSCPALPATPISIAKDDSDKESTTKPTTNFIIQRSASLKDRIQLSKKINEKTPPTSPTPTTPTTPASTPSGQLRSYEKPTPKQESAIGALASANQNIIDLIARRYSAPVEPPNNGVSNSSVRNNSVSDVSIKMPEKQANASQNQPNTPQTPTSPSTMLNKLSPGNIFKNIFKSFVPPTRDEESETQRKAHAKRVRETRRSTQGVTLDEIKSAEQLVKMKNANNNNSNGNTENSNNEQATERLSESTINAPETSVKEDEVNVNYTISSPLRKTSRTSVDQNDEDGEQKISATFTIAPPSRSNANSVGQLANQLEKSLDLETDVTATINVPLLSSSKSNSGDSDRIKKTDHPSPPLPPVPQPRSLFDLDNATSIKLADKLQQEAKKCDVNAVSEESSSPLSHITEPLPPSPIHHTIFGERRPSWRLKSDFNNKFKLEDASQSTSVSNSSQQTPPTTTTNGLIQDATKTTVVNTSTQRQSASENSVPNDSNSVVPKETPVTPNRSDDDKENDKENDSRGGLAIHRRRRPKRRSTGVVHVDMEDIDPEHRQESPADENNKDAMENRSRDIRYNRIKMFQLKIRK
| Type | Start | End | Length |
| CDS |
5895 |
5960 |
66 |
| CDS |
7980 |
8036 |
57 |
| CDS |
8101 |
8198 |
98 |
| CDS |
8261 |
8486 |
226 |
| CDS |
8794 |
9399 |
606 |
| CDS |
9580 |
9751 |
172 |
| CDS |
10055 |
10345 |
291 |
| CDS |
10505 |
10594 |
90 |
| CDS |
10761 |
10937 |
177 |
| CDS |
11380 |
11461 |
82 |
| CDS |
11526 |
11601 |
76 |
| intron |
5961 |
7979 |
2019 |
| intron |
8037 |
8100 |
64 |
| intron |
8199 |
8260 |
62 |
| intron |
8487 |
8793 |
307 |
| intron |
9400 |
9579 |
180 |
| intron |
9752 |
10054 |
303 |
| intron |
10346 |
10504 |
159 |
| intron |
10595 |
10760 |
166 |
| intron |
10938 |
11379 |
442 |
| intron |
11462 |
11525 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFN87569 |
Protein phosphatase 1 regulatory subunit 12A [Harpegnathos saltator] |
8e-40 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000446816 |
| N. vitripennis |
NV18107-PA |
| A. gambiae |
AGAP006665 |
| M. musculus |
ENSMUSG00000073557 |
| H. sapiens |
ENSP00000337897 |
| H. sapiens |
ENSP00000416769 |
| A. mellifera |
GB19581-PA |
| H. sapiens |
ENSP00000389168 |
| T. castaneum |
TC003209 |
| H. sapiens |
ENSP00000417159 |
| H. sapiens |
ENSP00000446855 |
| H. melpomene |
HMEL013867-PA |
| S. invicta |
SI2.2.0_05037 |
| P. humanus |
PHUM561400-PA |
| H. sapiens |
ENSP00000261207 |
| D. melanogaster |
FBgn0005536 |
| A. aegypti |
AAEL012753 |
| C. quinquefasciatus |
CPIJ006926 |
| S. invicta |
SI2.2.0_09944 |
| C. quinquefasciatus |
CPIJ006927 |
| P. vanderplanki |
Pv.17209 |
| D. plexippus |
DPOGS203899PA |
| H. sapiens |
ENSP00000384496 |
| H. sapiens |
ENSP00000449514 |
| M. musculus |
ENSMUSG00000019907 |
| H. sapiens |
ENSP00000349206 |
| B. mori |
BGIBMGA002008-TA |