MidgeBase gene description page [Pn.15629]
Outline
| Gene ID | Pn.15629 |
| Type | Protein coding gene |
| Scaffold | PnScaf32083 |
| Start | 819 |
| End | 6765 |
| Direction | - |
Sequence
Transcript: 1134 (bp)
ATGTCCATAAAATCAGGCAGACAGACAAAAACCAAAATGTTGGAGGAATCACCAAACTCAAAGCTGAACAAGGAGATTCTGAGTCGCTACACGACCTTGGAACTTCCCGAAGGACAAATCATCGCGACATACGTCTGGATTGACGGCACCGGCGAGAACCTCCGCTGCAAAGACAGAACCCTCAACTTCATTCCGTCGAGCCCGAAAGATTTGCCCATTTGGAACTACGATGGGTCGTCGACATATCAGGCGCTCGGCGAGAACTCGGACGTCTACCTGAAGCCCTGTGCCATCTACCGCGATCCGTTCCGACGCGGCAACCACATTTTAGTCCTGTGCGAGACATACAAGTATGACGGCACACCGATGAAGACAAACAACCGCAAGTCCTGCAGCGAGGTCGCCGACAAGTGCAAGGAGCACGAGCCGTGGTTCGGTATCGAGCAAGAGTACACGCTCCTCGACATGGACGGCCGACCACTGGGCTGGCCCAAAGGTGGTTATCCCGCTCCGCAGGGACCCTACTACTGCGGCGTCGGTGCCGACAAAGTCATCGCTCGTGACGTCGTTGACGCACACTACCGTGCATGTCTCTATGCCGGCATCAAGATCTGTGGAACGAACGCCGAAGTCATGCCTGCGCAATGGGAATTCCAAGTTGGACCCTGTGTCGGCGTCTCGATCGGCGACGACTTGTGGATGGCGCGCTTCTTGCTGCACCGAATCTCCGAAGACTTCGGCATTGTGTGCACAATGGACCCGAAGCCGCAGGTTGGAGATTGGAACGGCGCTGGCGCTCACACAAACGTCTCGACGAAGGAGACTCGCGCCGATGGCGGACTCGAGGCGATCAAGGAGGCTATCGAGAAGCTGTCGAAGAACCACGAGGCACACATCCGCGCCTACGACCCGCACGAAGGCAAAGACAACGAGCGCCGGCTGACGGGACGTCACGAGACGTCGAGCATTCACGAGTTCAAATCGGGTGTCGCCAACCGCGGCGCGTCCATTCGCATTCCGCGCGGAGTTTCCGACGAGGGCAAGGGCTATTTCGAGGACCGTCGTCCGTCGTCGAATTGCGACCCGTACTCGGTTGCCGAGCGCATCCTTCGCACCATCTGCCTCGACGAGTTC
Protein: 378 (aa)
MSIKSGRQTKTKMLEESPNSKLNKEILSRYTTLELPEGQIIATYVWIDGTGENLRCKDRTLNFIPSSPKDLPIWNYDGSSTYQALGENSDVYLKPCAIYRDPFRRGNHILVLCETYKYDGTPMKTNNRKSCSEVADKCKEHEPWFGIEQEYTLLDMDGRPLGWPKGGYPAPQGPYYCGVGADKVIARDVVDAHYRACLYAGIKICGTNAEVMPAQWEFQVGPCVGVSIGDDLWMARFLLHRISEDFGIVCTMDPKPQVGDWNGAGAHTNVSTKETRADGGLEAIKEAIEKLSKNHEAHIRAYDPHEGKDNERRLTGRHETSSIHEFKSGVANRGASIRIPRGVSDEGKGYFEDRRPSSNCDPYSVAERILRTICLDEF
| Type | Start | End | Length |
| CDS |
822 |
1307 |
486 |
| CDS |
1435 |
1747 |
313 |
| CDS |
1805 |
1931 |
127 |
| CDS |
3732 |
3806 |
75 |
| CDS |
3883 |
3999 |
117 |
| CDS |
6750 |
6765 |
16 |
| intron |
1308 |
1434 |
127 |
| intron |
1748 |
1804 |
57 |
| intron |
1932 |
3731 |
1800 |
| intron |
3807 |
3882 |
76 |
| intron |
4000 |
6749 |
2750 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001656718 |
glutamine synthetase 1, 2 (glutamate-amonia ligase) (gs) [Aedes aegypti] gb|EAT34276.1| glutamine synthetase 1, 2 (glutamate-amonia ligase) (gs) [Aedes aegypti] |
1e-174 |
| InterPro |
IPR008146 |
Glutamine synthetase, catalytic domain |
|
| InterPro |
IPR008147 |
Glutamine synthetase, beta-Grasp |
|
| InterPro |
IPR014746 |
Glutamine synthetase/guanido kinase, catalytic domain |
|
| Gene Ontology(BP) |
GO:0006807 |
nitrogen compound metabolic process |
|
| Gene Ontology(BP) |
GO:0006542 |
glutamine biosynthetic process |
|
| Gene Ontology(MF) |
GO:0004356 |
glutamate-ammonia ligase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF03951.14 |
Glutamine synthetase, beta-Grasp domain |
2.1e-19 |
| Pfam |
PF00120.19 |
Glutamine synthetase, catalytic domain |
4.8e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP008988 |
| C. quinquefasciatus |
CPIJ003744 |
| P. vanderplanki |
Pv.02558 |
| A. aegypti |
AAEL013458 |
| M. musculus |
ENSMUSG00000026473 |
| H. sapiens |
ENSP00000356537 |
| H. melpomene |
HMEL017041-PA |
| B. mori |
BGIBMGA004280-TA |
| D. plexippus |
DPOGS209638PA |
| N. vitripennis |
NV11493-PA |
| P. humanus |
PHUM009660-PA |
| P. vanderplanki |
Pv.08777 |
| C. quinquefasciatus |
CPIJ010973 |
| B. mori |
BGIBMGA000680-TA |
| H. melpomene |
HMEL012223-PA |
| P. humanus |
PHUM467880-PA |
| H. sapiens |
ENSP00000344958 |
| D. plexippus |
DPOGS200911PA |
| A. aegypti |
AAEL001887 |
| P. humanus |
PHUM130940-PA |
| H. sapiens |
ENSP00000398320 |
| B. mori |
BGIBMGA006703-TA |
| H. sapiens |
ENSP00000307900 |
| A. gambiae |
AGAP002355 |
| T. castaneum |
TC002601 |
| D. melanogaster |
FBgn0001142 |
| D. melanogaster |
FBgn0001145 |
| A. mellifera |
GB10139-PA |