MidgeBase gene description page [Pn.15515]
Outline
| Gene ID | Pn.15515 |
| Type | Protein coding gene |
| Scaffold | PnScaf31109 |
| Start | 1183 |
| End | 2242 |
| Direction | - |
Sequence
Transcript: 861 (bp)
ATGCTGTCGCAATTGCTTCTAAATTGTCATGGCTACGAGCGCATCGAGGGACGAGTCGTGAACGGAGTGCCGGCAGAGAGTATCATTCCGTATCAGGCATCGATAAGGGTTTCAATACGAGATTATTTGCGCATCGGCAGAGGCCACACGTGCGGAGGTGTTTTGGTGAAATCTCGAACTGTCCTCACTGCAGCCCACTGCCTCATGGACGGCGCTCGCTTCCGGACGCTCTTCGATATTCACGTTGTTCTAGGATCGCTTAATCGTTACGTTTTCACCCACGAGACTGTGATAGTGCACGTCGAGCGAATTTTCGTGCATCCCGAGTACCAAAGATTCGAGAGCTTCGCCCATGACATTGGACTGGTGATTCTCAGACGACATGTCGAATTCACCGACATCATCCGACCACTGCCGCTGATAGATTTTCCAATTGAGGCCGGCGCGCACTGTCGTGTAAGCGGATGGGGAGCGATGGAGTTTCGGGGCCTCATGCCGGCACGATTGCAGAAGGCAAATGTCACAATTGCCGATAGACGCATCTGCAACGGCTCGTACGGCGGAATAATAACCGACGGAATGGTCTGTGCAAACGGACAGACAGACGACGGCTCGATCATTGACGTGTGCCAAGGGGATTCCGGCGGACCGCTTCAGTGTGGCGGAAAGCTCGTCGGACTCGCCTCATTTGGCCTGCAGTGTGGCGTAAGCATCTATCATCCGGGCGTTTTTGTCGACGTCTATCACTACCGCAGTTGGATTATGGAGCACTGGAACGGTGCGGTTCGACAGCAAAGTCACAAAACCTCGATTCTCGTGTTCACACTTTTTGTTGTAAATTTAATTCGGATGTTTGAGCAA
Protein: 287 (aa)
MLSQLLLNCHGYERIEGRVVNGVPAESIIPYQASIRVSIRDYLRIGRGHTCGGVLVKSRTVLTAAHCLMDGARFRTLFDIHVVLGSLNRYVFTHETVIVHVERIFVHPEYQRFESFAHDIGLVILRRHVEFTDIIRPLPLIDFPIEAGAHCRVSGWGAMEFRGLMPARLQKANVTIADRRICNGSYGGIITDGMVCANGQTDDGSIIDVCQGDSGGPLQCGGKLVGLASFGLQCGVSIYHPGVFVDVYHYRSWIMEHWNGAVRQQSHKTSILVFTLFVVNLIRMFEQ
| Type | Start | End | Length |
| CDS |
1186 |
1409 |
224 |
| CDS |
1481 |
1745 |
265 |
| CDS |
1804 |
2150 |
347 |
| CDS |
2218 |
2242 |
25 |
| intron |
1410 |
1480 |
71 |
| intron |
1746 |
1803 |
58 |
| intron |
2151 |
2217 |
67 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ACV07661 |
serine protease II [Aedes aegypti] |
3e-42 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00366.15 |
Ribosomal protein S17 |
0.018 |
| Pfam |
PF13365.1 |
Trypsin-like peptidase domain |
0.035 |
| Pfam |
PF00089.21 |
Trypsin |
5.8e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.11624 |
| D. melanogaster |
FBgn0025378 |