MidgeBase gene description page [Pn.15415]

Outline

Link to gbrowse

Gene ID Pn.15415
Type Protein coding gene
Scaffold PnScaf30168
Start 99
End 3182
Direction -

Sequence

Transcript: 591 (bp)

 ATGATGAAGAAGGAGACGCGCTTTGATGTCGAAAATGGACAGCGGTCGCCACTGGAAGGAGGTGGCAGCCCCGCGGCCGGCCTCATTCTTCAGAACATGCCGCAACGGCGCGAATCATTTCTCTATCGATCTGATTCGGACTTTGAGATGTCACCAAAGTCGATGTCGCGGAACTCGAGCATCGCCAGTGAAAGAATCAAAGAAACTGAGTCGACACAGACGACAGTCGCGAACATCGGCAGTAGCGGGGGCGCGGAGCGAGCTCACGTGGAAGATTTAATCGTCACTCCGTTTGCACAAATTTTAGCGAGCCTCCGCTCGGTCAAGAACAATCTCTACAATCTCACCAGCGTCCAGCCGTCGTCAAATCGACCACGCCGCTCGCAGCCATCGACGTCGTCGCAACAGCCGATGGTGGCACGCAACATCGCACCCGGCGACGACGGCTACATGCGCCTCGCGATGGACACAATTGATGAACTCGAATGGTGCTTAGAACAACTGGAAACTGTGCAAACGCATCGTAGCGTGTCGGACATGGCTTCCCTCAAACAGTTAATCATCTTTCATAATCAAATCAGTGGAAAAGAG 

Protein: 197 (aa)

 MMKKETRFDVENGQRSPLEGGGSPAAGLILQNMPQRRESFLYRSDSDFEMSPKSMSRNSSIASERIKETESTQTTVANIGSSGGAERAHVEDLIVTPFAQILASLRSVKNNLYNLTSVQPSSNRPRRSQPSTSSQQPMVARNIAPGDDGYMRLAMDTIDELEWCLEQLETVQTHRSVSDMASLKQLIIFHNQISGKE 
Type Start End Length
CDS 102 140 39
CDS 356 539 184
CDS 606 779 174
CDS 1018 1191 174
CDS 3163 3182 20
intron 141 355 215
intron 540 605 66
intron 780 1017 238
intron 1192 3162 1971

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr AEQ94065 MIP16127p1 [Drosophila melanogaster] 1e-57

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID

Orthologous genes

Species Gene ID
H. sapiens ENSP00000397548
T. castaneum TC012592
S. invicta SI2.2.0_14102
B. mori BGIBMGA009961-TA
D. plexippus DPOGS205762PA