MidgeBase gene description page [Pn.15383]
Outline
| Gene ID | Pn.15383 |
| Type | Protein coding gene |
| Scaffold | PnScaf29929 |
| Start | 8030 |
| End | 10041 |
| Direction | - |
Sequence
Transcript: 1878 (bp)
ATGAGTGGTCAACAGTTGAATTATCTTCGACATCTCGGAGACAGTCAATTTATCTTACCGGATGGAGAAGCGTCAACATTCTTACGAGATGACCATTTGGATAAGCTACCACTGCCAAGTTTAGAGGACTCTTTAGAGAGATATTACAGGAACCTTCTGCCATTTGGAAACGAAAAAGAGTTAAAAAACTCAAGAAGAATAATTGAAGAATTTAAGACTGGAGCAGGACAGCGGTTGCATAAAATTCTCGCGGAAAAAGCATCTAAAGAAAATAATTGGGTATCAAAGTTCTGGGAAGATTACGCTTATCTTGAATATCGTACTCCGCTGGCACCCTACAGTGTTCAAATACAACCGATCATGTTGAACACAGTTGGTGTAAATGAAAGTCGAACAACCTGCCTTCGTAATTTTGCACGCATCTCCCATTATTTCGGACTCTATTTTCAAATTCTTCGAGCAGAAAAACTTCGTCCAGCTAAAAATCCAGATGGTAGCATTGTTTTTTCTTCCGACCAATTCAAACGACTTTTCAACACGTCACGAATACCGGGGGAAACAAAAGATGAAATCTTCAATTGTTTTAAAACGAAAGCTGAAGGTGAATGTCCCTCGACGGTAGTCGTCATTGCAAAGAGTCGACTTTTCCACTTTGACCTCATACAAAACGGGAAATTAATGTCACCACCCGAACTGCTGCACACACTTTCTTTAATTTATGAAAGAGTCAATAGCGAAGCTAGTAGTGAAAGCGTTTCCATACCTTTGCTAACGTGTGACGAAAGAACTAGTTGGTATCGAAATCAAAAACATCTGATTGATATTTCAAAGGAAAATGAGAAATTTCTTGAAATCGTTGAAAGCTCAATGATGGTTTTCACTTTAGATGATTATGAGCCTCATGATGTTTCTGAAGTGTGTGCTAGACTACTCGATAGAAACTTTCATTCAAAGTGGATAGATAAGTCAGTATCCATGACTGTTTTTGCAAATGGCAAATTCGGGTGCATTGGCGAACACAGTTCTTATGATGGTCCCGTTTCTATGAACTATGGTGCTTTCATTCTCGACAGTTTTGCCGAAGATCCGGAACCAGATTGGAATCAAGAACTGAGCCTTAAAGTGATTCCAAACGAAATTAAATTTAAAATTGATGGAATCATAAAAAGTGAAATTGCTAGAGTTGAAAAAGTACTAACTAGTTATGAAAATTCAATCGTCGTTCTTGCTCAAGAATTTCGTGGTTTTGGGAAAAAATTTATGAAGACCAATAGAGTTCACCCAGATTGTTATGTACAAATGGCTCTGCAACTTGCATATTACAGACTTCACAATAAACTCGCGCCAACCTATGAAACGGCAACAATGAGGCAATACTATCGTGGGAGAACGGAAACTGTGAGGTCATGTTCCATTGAGGTGAAGAATTGGCTCGAAAAAATGCACCAGAATGAAGCGAAAGCAAGTGAGAAAGAAAAACTTTTTAGAGAAGCCGCAAATTCACAGCATAAATTAATGAACGATGCGAGAAGTGGCAAGGGCTTTGATAGACATCTCTTTGCTATGTGGTGCATTGCACGTGAACAGAATATTCCCGTGCCCGAGCTCTACAGTGATCCAATGTATTTTAAATCGGGTGGCGGTGGAAACTTTTACCTGTCGACATCGACCCTTGGCTACACAATATGCAACGGTTGTGTTGCCCCAATGCTTACTGATGGTTACGGTGTGTTCTATACTATGCTCGATAATTTTGTTTGGATAATTTTGAGCACGTTTCGCGAGAGTAAAGTTGCATCTTGCGAGAAATTTTATTCAGCTTTTGACAGTGCCATGAACGATATCCGTCTATTGCTTGAAGCTTCAACCTCAAAACTA
Protein: 626 (aa)
MSGQQLNYLRHLGDSQFILPDGEASTFLRDDHLDKLPLPSLEDSLERYYRNLLPFGNEKELKNSRRIIEEFKTGAGQRLHKILAEKASKENNWVSKFWEDYAYLEYRTPLAPYSVQIQPIMLNTVGVNESRTTCLRNFARISHYFGLYFQILRAEKLRPAKNPDGSIVFSSDQFKRLFNTSRIPGETKDEIFNCFKTKAEGECPSTVVVIAKSRLFHFDLIQNGKLMSPPELLHTLSLIYERVNSEASSESVSIPLLTCDERTSWYRNQKHLIDISKENEKFLEIVESSMMVFTLDDYEPHDVSEVCARLLDRNFHSKWIDKSVSMTVFANGKFGCIGEHSSYDGPVSMNYGAFILDSFAEDPEPDWNQELSLKVIPNEIKFKIDGIIKSEIARVEKVLTSYENSIVVLAQEFRGFGKKFMKTNRVHPDCYVQMALQLAYYRLHNKLAPTYETATMRQYYRGRTETVRSCSIEVKNWLEKMHQNEAKASEKEKLFREAANSQHKLMNDARSGKGFDRHLFAMWCIAREQNIPVPELYSDPMYFKSGGGGNFYLSTSTLGYTICNGCVAPMLTDGYGVFYTMLDNFVWIILSTFRESKVASCEKFYSAFDSAMNDIRLLLEASTSKL
| Type | Start | End | Length |
| CDS |
8033 |
9631 |
1599 |
| CDS |
9686 |
9926 |
241 |
| CDS |
10004 |
10041 |
38 |
| intron |
9632 |
9685 |
54 |
| intron |
9927 |
10003 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846771 |
peroxisomal carnitine O-octanoyltransferase [Culex quinquefasciatus] gb|EDS44596.1| peroxisomal carnitine O-octanoyltransferase [Culex quinquefasciatus] |
1e-173 |
| InterPro |
IPR000542 |
Acyltransferase ChoActase/COT/CPT |
|
| Gene Ontology(MF) |
GO:0016746 |
transferase activity, transferring acyl groups |
|
| Pfam |
PF00755.15 |
Choline/Carnitine o-acyltransferase |
2.5e-145 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000411983 |
| H. sapiens |
ENSP00000331981 |
| P. humanus |
PHUM025470-PA |
| C. quinquefasciatus |
CPIJ005329 |
| P. vanderplanki |
Pv.07902 |
| H. sapiens |
ENSP00000413575 |
| M. musculus |
ENSMUSG00000003623 |
| A. gambiae |
AGAP002329 |
| D. melanogaster |
FBgn0039543 |
| P. vanderplanki |
Pv.07901 |
| P. vanderplanki |
Pv.11877 |
| A. aegypti |
AAEL005169 |