MidgeBase gene description page [Pn.15340]
Outline
| Gene ID | Pn.15340 |
| Type | Protein coding gene |
| Scaffold | PnScaf29573 |
| Start | 36311 |
| End | 37423 |
| Direction | + |
Sequence
Transcript: 1110 (bp)
ATGGCAGCGGTATTTCAATGCTTCAGAAATACGGGTGCGCTCTTGGTGGTCGCAGGTTTCACGACAACAGCTCTTCATATTCGCAGGGTAAATATGGAATCGGTGAAGAAGATTGACGTGTCGAAGTTCATGGCAGAGCCCATCACGCCGGTTGAAAAGCTCAGCCAGAACAGCAACGACATGCGTACGAAGATGGAGCTCATGATCATGAAGATCCAGGCGGACTTTGTGCGCGCTCTCGAGGGCGAGGAGAATTTCGGCAAGAAGTTCAAGGTCGACCGATGGGAGAGAAGCGAGGGAGGCGGTGGTGTGACGTGCGTCATCCAGGACGGCGACACCTTCGAGAAGGCTGGCGTGAATGTGTCGATTGTGTCGGGTATGCTGCCGAAGGCGGCTGTGCAGCAGATGCGCGCCCGCGGCAAGAACATGTCGGACCGCGAGCACCCGTTCTTCGCGGCCGGCATCAGCTGCGTCATCCACCCGCGCAATCCGTACGTGCCAACCATTCACTTCAACTACCGCTACTTCGAGCTCGTCGACGACGACGGCAAGAAGATGTGGTGGTTCGGCGGCGGCACCGACCTCACGCCTTACTACTATAACGAGAAGGACGCGCTGCACTTCCACAAGACGCTCAAGAACGCGTGCGACCTCCACGACAAGAGCTTCTATCCGAAGTACAAGGAGTGGTGCGACAAGTACTTCACCATCACACACCGCAACGAGACGCGCGGCATCGGCGGCATCTTCTTCGACGACATCGACTCGCCGTCGATCGAGGAGTGCTTCGAGTTTGCGAAGACCTGCGCCGAGGCCGTCACGCCGTCATACGTGCCGCTTGTGAGGAAGCACAAGAACGACCACTACGGAGATCGCGAGCGAACATGGCAGTTGATAAGGCGCGGACGCTACGTCGAGTTCAACTTGGTGTACGATCGCGGAACAAAGTTCGGCCTCTACACGCCCGGCGCACGCATTGAGAGTATTCTCATGTCGCTGCCGCAGACTGCACGCTGGGAGTACATGCACGAGCCGAGTCCCGACAGCGACGAGGGCAAGCTGTTGCAGGTAACGCGAAAACCCGTCGACTTTGTCGCCATGCTCTCAAAG
Protein: 370 (aa)
MAAVFQCFRNTGALLVVAGFTTTALHIRRVNMESVKKIDVSKFMAEPITPVEKLSQNSNDMRTKMELMIMKIQADFVRALEGEENFGKKFKVDRWERSEGGGGVTCVIQDGDTFEKAGVNVSIVSGMLPKAAVQQMRARGKNMSDREHPFFAAGISCVIHPRNPYVPTIHFNYRYFELVDDDGKKMWWFGGGTDLTPYYYNEKDALHFHKTLKNACDLHDKSFYPKYKEWCDKYFTITHRNETRGIGGIFFDDIDSPSIEECFEFAKTCAEAVTPSYVPLVRKHKNDHYGDRERTWQLIRRGRYVEFNLVYDRGTKFGLYTPGARIESILMSLPQTARWEYMHEPSPDSDEGKLLQVTRKPVDFVAMLSK
| Type | Start | End | Length |
| CDS |
36311 |
37420 |
1110 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663577 |
coproporphyrinogen iii oxidase [Aedes aegypti] gb|EAT34350.1| coproporphyrinogen iii oxidase [Aedes aegypti] |
1e-154 |
| InterPro |
IPR001260 |
Coproporphyrinogen III oxidase, aerobic |
|
| InterPro |
IPR018375 |
Coproporphyrinogen III oxidase, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(BP) |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
|
| Gene Ontology(MF) |
GO:0004109 |
coproporphyrinogen oxidase activity |
|
| Pfam |
PF01218.13 |
Coproporphyrinogen III oxidase |
8.3e-130 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.08589 |
| C. quinquefasciatus |
CPIJ006245 |
| H. sapiens |
ENSP00000264193 |
| P. humanus |
PHUM212330-PA |
| B. mori |
BGIBMGA011268-TA |
| N. vitripennis |
NV17013-PA |
| T. castaneum |
TC000466 |
| A. aegypti |
AAEL013389 |
| A. gambiae |
AGAP004749 |
| H. melpomene |
HMEL013545-PA |
| S. invicta |
SI2.2.0_09923 |
| M. musculus |
ENSMUSG00000022742 |
| D. plexippus |
DPOGS209982PA |
| D. melanogaster |
FBgn0021944 |
| A. mellifera |
GB20030-PA |