MidgeBase gene description page [Pn.15318]
Outline
| Gene ID | Pn.15318 |
| Type | Protein coding gene |
| Scaffold | PnScaf29449 |
| Start | 1754 |
| End | 3862 |
| Direction | + |
Sequence
Transcript: 1905 (bp)
ATGACAACGGACTCCGAAAAAGTAGAAATACTTCTTAAAGTAAACGAGGCACCAGATTTGCAGGCAGCACACTCATTTGCTGTGAACAAAAATTTTGCAGGCTTAATTACAGGACTAGTAAATGAAAACTATAAGTCGGACTATGAACCATCTGATGAGCCGGAGTGTTTCACGCGTTCACCGCTAATCCTGACTTCCAACCAGTGGCTCAACCGCATAACTCCAATGTTCACTATTGACTGCGACTTGAATTCGCCGAAGCCGTACATTGCAGACAACTATCGAGCCACGCTCGAGAAATATTTGCGATTTGGAGCTTTCGTAAAGAATACCGGATGTTTCTTGATAAAACCGAATGAATGTGATGCAGTTACCTTAGGAAATTTCCTAAATACAGTTTTGGAAGATCGAGCATTTACGTTTGTTAATTTTGCCGTTCAAATTGATCTGTTTAGCGCCTCAAATGTCGGAAAAAGTTACCGCAACGACCTTACAGAAGACCAAAGAGAAGAGGAGGATGATTCGTGGCTGTATTGGAATACGCTGCACAAGGCTACGAACTACAACAGCCGCATTCAAGTCGCGCTCGTGATCAATTCGAATTTGCCAAACAGCAACGTGTCAATCTATCGTTGGATCGGAGACGATATCCGGATGATCATTGTTCCTCATTCGTCGTTCATTACGAACAAATCCAACTTTCCACTGCTGTCGAAGCGCCACCAAGAAATCGTGCGTATGTTCATGCAATACTCGACAAACACAGTTGTCATCGAGCCGAAATCACTTCTGGATCATCGAATTGAGTTGTACAAGGACTACATAAAGCATCAGAGCAAATTCATTACGTACAACGAGCACTCGTCTGGAAAAGACTGTCCAAATTATCCGCTCCAACCACTCCACGACAATCTCGACAATGGAGTTTACGAGGTGTTTGAGCGAGATCCCGCGAAGTACGTACTGTATCAAAAAGCGATAGAAGCTGCTCTCGTTGACATGGTGTCGCCCGAGGAGTTAGAGACTAAAACCATCCTGCTAATGGTTGTTGGATGTGGGCGAGGTCCACTTATACGCGCAGCTCTCAACGCAAGTACGAATACAAAGAGAAAAATGAAGATCTTGGCTGTTGAGAAAAATCCAAATGCCATCGTCGTGCTGAGCTGCCTTATTCGGGATTTGTGGTCGGACAAGGTCCAACTCATATCAAAGGACATGCGCGACTTGCAGCTGGATGAAAAAGTGGACATTGTTGTCTCAGAATTGCTGGGATCTTTCGGCGACAATGAGCTCTCACCCGAGTGCCTCGATGGCGTTCAACGCTTGCTTAAGCCGGACACTGGAATCAGTATACCGGCCAACTCTATCTCGTACATTCAGCCAGTGATGACCAAGCGAGTGTCGAATGCAATTAAAAGCATTACTGGAGGAGTAAAGAGCCCCAATTTCAACGAAAAGAGTAACCCTGAATTCTACAAGTCCCTCGAAGCCAACTGGCTCGTTTACTTTTCGAGCGTGTTTCATGTTGACGAGACAAAGGAGCTCTTTACGTTTGTGCATCCGAACAAGGACGTTCCAATCGACAACAGTCGCCATGCCATAGTAACATTCAAGTCGACGGTTGACTGTGTGCTTCACGGCGTCGCCGGGTATTTTACGTCACAGCTTTACAAGGACATTGAGATTTCGATTCATCCCGAAACACACACGCAGGGCATGAGCTCGTGGTACAGCGCCTTTTTCCCAATTGCTAATGAAATTCAGCTGAAGGAAAATGATCCGATCGAAGTGGAATTCTGGAGAAAATGCGATGAAAAGCGAGTTTGGTATGAGTGGCGAATCAATCGCCCAGAAATAAGTCATGTTCACAATCTCAACGGAAGTGCTCACACGATTCATCTTTTG
Protein: 635 (aa)
MTTDSEKVEILLKVNEAPDLQAAHSFAVNKNFAGLITGLVNENYKSDYEPSDEPECFTRSPLILTSNQWLNRITPMFTIDCDLNSPKPYIADNYRATLEKYLRFGAFVKNTGCFLIKPNECDAVTLGNFLNTVLEDRAFTFVNFAVQIDLFSASNVGKSYRNDLTEDQREEEDDSWLYWNTLHKATNYNSRIQVALVINSNLPNSNVSIYRWIGDDIRMIIVPHSSFITNKSNFPLLSKRHQEIVRMFMQYSTNTVVIEPKSLLDHRIELYKDYIKHQSKFITYNEHSSGKDCPNYPLQPLHDNLDNGVYEVFERDPAKYVLYQKAIEAALVDMVSPEELETKTILLMVVGCGRGPLIRAALNASTNTKRKMKILAVEKNPNAIVVLSCLIRDLWSDKVQLISKDMRDLQLDEKVDIVVSELLGSFGDNELSPECLDGVQRLLKPDTGISIPANSISYIQPVMTKRVSNAIKSITGGVKSPNFNEKSNPEFYKSLEANWLVYFSSVFHVDETKELFTFVHPNKDVPIDNSRHAIVTFKSTVDCVLHGVAGYFTSQLYKDIEISIHPETHTQGMSSWYSAFFPIANEIQLKENDPIEVEFWRKCDEKRVWYEWRINRPEISHVHNLNGSAHTIHLL
| Type | Start | End | Length |
| CDS |
1754 |
1816 |
63 |
| CDS |
1878 |
2744 |
867 |
| CDS |
2813 |
2884 |
72 |
| CDS |
2957 |
3859 |
903 |
| intron |
1817 |
1877 |
61 |
| intron |
2745 |
2812 |
68 |
| intron |
2885 |
2956 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001843693 |
arginine N-methyltransferase skb1 [Culex quinquefasciatus] gb|EDS33904.1| arginine N-methyltransferase skb1 [Culex quinquefasciatus] |
1e-139 |
| InterPro |
IPR007857 |
Protein arginine N-methyltransferase PRMT5 |
|
| InterPro |
IPR025799 |
Protein arginine N-methyltransferase |
|
| Gene Ontology(BP) |
GO:0006479 |
protein methylation |
|
| Gene Ontology(MF) |
GO:0008168 |
methyltransferase activity |
|
| Pfam |
PF09969.4 |
Uncharacterized conserved protein (DUF2203) |
0.0042 |
| Pfam |
PF08242.7 |
Methyltransferase domain |
0.013 |
| Pfam |
PF07757.8 |
Predicted AdoMet-dependent methyltransferase |
0.061 |
| Pfam |
PF02475.11 |
Met-10+ like-protein |
0.065 |
| Pfam |
PF05185.11 |
PRMT5 arginine-N-methyltransferase |
2e-145 |
| Pfam |
PF02841.9 |
Guanylate-binding protein, C-terminal domain |
0.08 |
| Pfam |
PF13847.1 |
Methyltransferase domain |
2.8e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. gambiae |
AGAP009048 |
| A. aegypti |
AAEL007578 |
| H. sapiens |
ENSP00000216350 |
| H. sapiens |
ENSP00000452555 |
| H. melpomene |
HMEL007819-PA |
| N. vitripennis |
NV18830-PA |
| A. mellifera |
GB15747-PA |
| D. plexippus |
DPOGS204390PA |
| S. invicta |
SI2.2.0_08236 |
| D. melanogaster |
FBgn0015925 |
| H. sapiens |
ENSP00000380582 |
| B. mori |
BGIBMGA007842-TA |
| H. sapiens |
ENSP00000444915 |
| H. sapiens |
ENSP00000380583 |
| H. sapiens |
ENSP00000319169 |
| M. musculus |
ENSMUSG00000023110 |
| C. quinquefasciatus |
CPIJ801696 |
| P. vanderplanki |
Pv.02225 |
| T. castaneum |
TC003689 |
| P. humanus |
PHUM336830-PA |
| H. sapiens |
ENSP00000452409 |