MidgeBase gene description page [Pn.15293]
Outline
| Gene ID | Pn.15293 |
| Type | Protein coding gene |
| Scaffold | PnScaf29284 |
| Start | 4653 |
| End | 4997 |
| Direction | - |
Sequence
Transcript: 342 (bp)
ATGCCAATATTTCCGCACCGGAAGTTTACTCCGAAACTTCCGAAACAGAGGGAGTTGCGACTGAGCTCGGTTCCAAAGCTGGCGGAGGAGATAGATGATTTTCGCAATATTAAGCTGAAACTGAGCGGTGAAAGGGAGTTTCAGTTTGTCGACGGCGTTTGGATAAGTCTCAGCAAGAAAAGTCAACAGCTCGACGCGAACGACGATGTGGCGAGGATTGTCAAGGAGAACAAGCGACTCGAGGACGACAATGCAATGCTCAATGCGAAGATGGACATCATGCTCGATCTGCTCACCGAGTGTGTGTGCGAGAAAGAGGCAATTCAAGCAAGCAGCCGAATG
Protein: 114 (aa)
MPIFPHRKFTPKLPKQRELRLSSVPKLAEEIDDFRNIKLKLSGEREFQFVDGVWISLSKKSQQLDANDDVARIVKENKRLEDDNAMLNAKMDIMLDLLTECVCEKEAIQASSRM
| Type | Start | End | Length |
| CDS |
4656 |
4997 |
342 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001688425 |
AGAP004219-PA [Anopheles gambiae str. PEST] gb|EDO64184.2| AGAP004219-PA [Anopheles gambiae str. PEST] |
3e-12 |
| Pfam |
PF01517.13 |
Hepatitis delta virus delta antigen |
0.04 |
| Pfam |
PF12711.2 |
Kinesin motor |
0.016 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL005575-PA |
| A. mellifera |
GB10864-PA |
| H. sapiens |
ENSP00000380026 |
| A. gambiae |
AGAP012739 |
| C. quinquefasciatus |
CPIJ002404 |
| A. aegypti |
AAEL013081 |
| D. plexippus |
DPOGS205896PA |
| H. sapiens |
ENSP00000412260 |
| P. vanderplanki |
Pv.10159 |
| A. gambiae |
AGAP004219 |
| D. melanogaster |
FBgn0067317 |
| T. castaneum |
TC005450 |
| M. musculus |
ENSMUSG00000022428 |
| S. invicta |
SI2.2.0_08884 |
| N. vitripennis |
NV14449-PA |
| H. sapiens |
ENSP00000216029 |
| A. aegypti |
AAEL013414 |