MidgeBase gene description page [Pn.15289]
Outline
| Gene ID | Pn.15289 |
| Type | Protein coding gene |
| Scaffold | PnScaf29263 |
| Start | 71512 |
| End | 72744 |
| Direction | + |
Sequence
Transcript: 828 (bp)
ATGGCAACGGAGGCAAGAGTTTCGAAGGAAGAGTGGACTAGAGCTGTCTTGGACATTCCACCCGATTTTCTGCGATTGCAAGGCGAAGCCAGGGACAGAGAGGTTGCGATGGCGTTACATCAGCAGCAAATCGGGCACTTCAATCATATTGGCCTCGCAGCGAATACAGTTGGCCGGCTTTCGATAACAGTGGCGCAGGCAAAACTCACGAAGAATTACGGAATTACGAGAATGGATCCATACGTGAGAATTCGTGTTGGTCACTACATTTATGAAACGCAGACTGATACCAATGGAGGAAAGACGCCGCACTGGAACAGAGTTTTTCATACGCAGCTACCGAGTGGCGTAAACAAAATTTTTCTAGAAATCTACGACGAATGTAACTTCACTATGGACGAATTGATTGCTTGGGCCGAAATTCGAATTCCAGAAGCGGTCATCGAAAAATGCGAAACACACGAGGACTGGTACGCTCTATCAGGCAAATCCGGCGACAATAAGGAAGGCATGATCGACCTTGTGCTTTCTTTCACCCCTGCTTCTTGTCTCTACCAGAGACCAGCACAGCAACCCGTCGTTCTCGTTCCAAATGTCTCGAATCGGGCCCTTCCTGTATATGTTTCTCCGACACCCATCCAGCAAATTGCTCAACTGCCTCCACCAACTGCACAGCCACCGCCACCGCCGCAACCACTGACTGATGAGGACATTGCGAATCTTATGGAAATGTTTCCGAACGTCGACAAAGATGTCATTAAATCGATTGGAGAGGCTAACAGAGGCGATAAAAATGCAACAATCAACTCGTTGCTTCAACTAACCAAC
Protein: 276 (aa)
MATEARVSKEEWTRAVLDIPPDFLRLQGEARDREVAMALHQQQIGHFNHIGLAANTVGRLSITVAQAKLTKNYGITRMDPYVRIRVGHYIYETQTDTNGGKTPHWNRVFHTQLPSGVNKIFLEIYDECNFTMDELIAWAEIRIPEAVIEKCETHEDWYALSGKSGDNKEGMIDLVLSFTPASCLYQRPAQQPVVLVPNVSNRALPVYVSPTPIQQIAQLPPPTAQPPPPPQPLTDEDIANLMEMFPNVDKDVIKSIGEANRGDKNATINSLLQLTN
| Type | Start | End | Length |
| CDS |
71512 |
71553 |
42 |
| CDS |
71671 |
71787 |
117 |
| CDS |
71881 |
72126 |
246 |
| CDS |
72241 |
72452 |
212 |
| CDS |
72531 |
72741 |
211 |
| intron |
71554 |
71670 |
117 |
| intron |
71788 |
71880 |
93 |
| intron |
72127 |
72240 |
114 |
| intron |
72453 |
72530 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_562476 |
AGAP003615-PA [Anopheles gambiae str. PEST] gb|EAL40603.3| AGAP003615-PA [Anopheles gambiae str. PEST] |
1e-73 |
| InterPro |
IPR018029 |
C2 membrane targeting protein |
|
| InterPro |
IPR008973 |
C2 calcium/lipid-binding domain, CaLB |
|
| InterPro |
IPR003892 |
Ubiquitin system component Cue |
|
| InterPro |
IPR009060 |
UBA-like |
|
| InterPro |
IPR000008 |
C2 calcium-dependent membrane targeting |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF02845.11 |
CUE domain |
1.7e-09 |
| Pfam |
PF00168.25 |
C2 domain |
1.3e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB17961-PA |
| B. mori |
BGIBMGA009216-TA |
| H. sapiens |
ENSP00000434494 |
| H. sapiens |
ENSP00000436393 |
| P. vanderplanki |
Pv.12009 |
| N. vitripennis |
NV17313-PA |
| H. sapiens |
ENSP00000434035 |
| H. sapiens |
ENSP00000437404 |
| T. castaneum |
TC007125 |
| P. humanus |
PHUM008100-PA |
| H. sapiens |
ENSP00000263646 |
| A. gambiae |
AGAP003615 |
| D. plexippus |
DPOGS216101PA |
| S. invicta |
SI2.2.0_15302 |
| M. musculus |
ENSMUSG00000025139 |
| H. melpomene |
HMEL008011-PA |
| H. sapiens |
ENSP00000432668 |
| H. sapiens |
ENSP00000314733 |