MidgeBase gene description page [Pn.15238]
Outline
| Gene ID | Pn.15238 |
| Type | Protein coding gene |
| Scaffold | PnScaf29179 |
| Start | 66 |
| End | 2045 |
| Direction | - |
Sequence
Transcript: 1323 (bp)
ATGACGTTCGAGGATTTGATGAGCCGCGCAGCTTCGGCGTTTCAAAGCGGAAAAACCAAGGACGTCGATTTCAGACGAAAGCAGCTGAAGTCTCTGCTGAGGATGTATGAGGAGAATAAGGAAGAGATGGTTCGAGTTTTGGCCGCTGACTTAAGACGTCCGAAGCAAGAATCCTACATTTTGGAGATTGAGTTCATCATCAACGATACCCTTATGTTGATAAACAACCTTGACGAGTGGACTAAACCTGAAAAGCCCGAGAAGGGAATTGTGAACATAATGGATGATGTTCTGATCTATCCTGACCCTCTGGGTGTTGTACTAGTCATGGGCGCCTGGAATTATCCACTTCAGCTTCCACTTCTTCCTTTTGCTGCAGCAATCGCAGCCGGAAATGTTGCCATTCTGAAACCCAGCGAAATTTCTGTGAACTGTGCAAACTTCATTGCCGAGAACATACCAAAGTATTTAGATAATGAGTGCTACCATGTCGTTTGTGGAGGGGTTGCTGAGACGACGGAACTGCTGAAAAATAAGTTTGACTACATCTTCTACACCGGTTCTGGTCGTGTTGGACAAATCGTCTATGAGGCTGCGGCTAAGCACTTGACCCCAGTGACATTGGAGTTGGGCGGAAAGTCACCTTGCTATATCGATAACACGGTTGACATTGCAAAGGCAGCAAGAAGAGTGCTGTGGGGCAAGTTCATCAATGCCGGTCAAACATGCATCGCTCCTGACTACATAATGTGTACCAAAGAAGTCCAAGAGAAGTTCGTAAAAGAGGCCAAGGTAGTGGTTAAGGAATGGTATGGTAATGACATCAAAAAGAGCCCTGACTATTGTCGTATCGTCAATCAGCCAAACTTCCAACGATTGTCAAAGTTGCTGTCGAGCGGAGCCATTGCTGTGGGTGGTAAAACTGACGCCGACGAAAGATTCATTGAACCAACCATTCTGGTCGACGTTAAGGAAACTGATGCTGTCATGCAGGAGGAAATTTTTGGACCAATTCTGCCTATAATTAATGTTAACAATGCATTTGAAGCCATCAAGTTTATCACGGCGAGAGATAAACCCTTGGCTCTCTACATTTTTTCAAACAACGCCAACGACCGTCAGCTAATCATCGAAAATACTTCATCGGGAGGTGTTTGTGTCAATGATACCATCATGCATCTTGCCGTAGACACAATTCCATTCGGAGGCGTTGGACCCAGCGGAATTGGTGGTTATCATGGAAAGTACTCGTTTGACACCTTTTCGCATAAGAAGTCTTGTTTGGTGAAGAAAATTGACACAATCAGTGAGAAATTGTCGGAG
Protein: 441 (aa)
MTFEDLMSRAASAFQSGKTKDVDFRRKQLKSLLRMYEENKEEMVRVLAADLRRPKQESYILEIEFIINDTLMLINNLDEWTKPEKPEKGIVNIMDDVLIYPDPLGVVLVMGAWNYPLQLPLLPFAAAIAAGNVAILKPSEISVNCANFIAENIPKYLDNECYHVVCGGVAETTELLKNKFDYIFYTGSGRVGQIVYEAAAKHLTPVTLELGGKSPCYIDNTVDIAKAARRVLWGKFINAGQTCIAPDYIMCTKEVQEKFVKEAKVVVKEWYGNDIKKSPDYCRIVNQPNFQRLSKLLSSGAIAVGGKTDADERFIEPTILVDVKETDAVMQEEIFGPILPIINVNNAFEAIKFITARDKPLALYIFSNNANDRQLIIENTSSGGVCVNDTIMHLAVDTIPFGGVGPSGIGGYHGKYSFDTFSHKKSCLVKKIDTISEKLSE
| Type | Start | End | Length |
| CDS |
69 |
169 |
101 |
| CDS |
234 |
260 |
27 |
| CDS |
316 |
440 |
125 |
| CDS |
568 |
765 |
198 |
| CDS |
831 |
1047 |
217 |
| CDS |
1114 |
1209 |
96 |
| CDS |
1277 |
1358 |
82 |
| CDS |
1442 |
1663 |
222 |
| CDS |
1738 |
1837 |
100 |
| CDS |
1891 |
2045 |
155 |
| intron |
170 |
233 |
64 |
| intron |
261 |
315 |
55 |
| intron |
441 |
567 |
127 |
| intron |
766 |
830 |
65 |
| intron |
1048 |
1113 |
66 |
| intron |
1210 |
1276 |
67 |
| intron |
1359 |
1441 |
83 |
| intron |
1664 |
1737 |
74 |
| intron |
1838 |
1890 |
53 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001688504 |
AGAP005124-PB [Anopheles gambiae str. PEST] gb|EDO64087.1| AGAP005124-PB [Anopheles gambiae str. PEST] |
1e-180 |
| InterPro |
IPR016161 |
Aldehyde/histidinol dehydrogenase |
|
| InterPro |
IPR015590 |
Aldehyde dehydrogenase domain |
|
| InterPro |
IPR016162 |
Aldehyde dehydrogenase, N-terminal |
|
| InterPro |
IPR012394 |
Aldehyde dehydrogenase NAD(P)-dependent |
|
| InterPro |
IPR016160 |
Aldehyde dehydrogenase, conserved site |
|
| InterPro |
IPR016163 |
Aldehyde dehydrogenase, C-terminal |
|
| Gene Ontology(BP) |
GO:0006081 |
cellular aldehyde metabolic process |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Gene Ontology(MF) |
GO:0004030 |
aldehyde dehydrogenase [NAD(P)+] activity |
|
| Pfam |
PF05237.8 |
MoeZ/MoeB domain |
0.069 |
| Pfam |
PF00171.17 |
Aldehyde dehydrogenase family |
5.1e-81 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL012162 |
| A. gambiae |
AGAP005124 |
| H. sapiens |
ENSP00000388369 |
| C. quinquefasciatus |
CPIJ002285 |
| P. humanus |
PHUM593980-PA |
| H. sapiens |
ENSP00000461916 |
| A. aegypti |
AAEL009664 |
| C. quinquefasciatus |
CPIJ002286 |
| D. plexippus |
DPOGS215931PA |
| M. musculus |
ENSMUSG00000019102 |
| H. sapiens |
ENSP00000255084 |
| M. musculus |
ENSMUSG00000010025 |
| P. vanderplanki |
Pv.06918 |
| P. vanderplanki |
Pv.03683 |
| B. mori |
BGIBMGA001966-TA |
| T. castaneum |
TC005623 |
| H. sapiens |
ENSP00000225740 |
| S. invicta |
SI2.2.0_08837 |
| D. melanogaster |
FBgn0010548 |
| A. mellifera |
GB12681-PA |
| H. sapiens |
ENSP00000431595 |
| H. melpomene |
HMEL004160-PA |
| T. castaneum |
TC005624 |
| B. mori |
BGIBMGA001965-TA |
| H. sapiens |
ENSP00000460482 |
| H. sapiens |
ENSP00000378923 |
| N. vitripennis |
NV16074-PA |
| T. castaneum |
TC015979 |
| T. castaneum |
TC005625 |
| H. sapiens |
ENSP00000378942 |
| H. sapiens |
ENSP00000176643 |
| H. sapiens |
ENSP00000389766 |
| H. sapiens |
ENSP00000388469 |
| H. sapiens |
ENSP00000411821 |
| M. musculus |
ENSMUSG00000024885 |
| H. sapiens |
ENSP00000463637 |
| M. musculus |
ENSMUSG00000075296 |
| H. sapiens |
ENSP00000345774 |
| H. sapiens |
ENSP00000464153 |
| T. castaneum |
TC015978 |
| H. sapiens |
ENSP00000434685 |