MidgeBase gene description page [Pn.15222]
Outline
| Gene ID | Pn.15222 |
| Type | Protein coding gene |
| Scaffold | PnScaf28898 |
| Start | 1221 |
| End | 7072 |
| Direction | - |
Sequence
Transcript: 333 (bp)
ATGAAAGTCAAGCAAGTAAAAGAGGCGAAAACAACGAAATATTGTGATGTCTCTATGCACTCGCGGCTTGACTCGTGCCGAGGCGTGACTGTCAACGAAATGGGCAGTGAGCAATACTGCTTAAGGTGGAATAATCATCAATCCAACCTGTTAGGGGTCTTTAGTCAACTACTGCAGGACGAGAGCTTGGTGGACGTTACATTAGCTTGCTCAGAGGGCACTTCCATCCGAGCCCACAAGCTTTTAAGTCTGAGTTGTTGTGACCATGACTTGATTTGGACTTCAAAACAGCTCGGCACTCGACCAACAGCCGAAAAAATCAGGATCAGCGGA
Protein: 111 (aa)
MKVKQVKEAKTTKYCDVSMHSRLDSCRGVTVNEMGSEQYCLRWNNHQSNLLGVFSQLLQDESLVDVTLACSEGTSIRAHKLLSLSCCDHDLIWTSKQLGTRPTAEKIRISG
| Type | Start | End | Length |
| CDS |
1224 |
1316 |
93 |
| CDS |
5981 |
6137 |
157 |
| CDS |
6990 |
7072 |
83 |
| intron |
1317 |
5980 |
4664 |
| intron |
6138 |
6989 |
852 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EHJ76380 |
hypothetical protein KGM_16406 [Danaus plexippus] |
1e-19 |
| InterPro |
IPR011333 |
BTB/POZ fold |
|
| Pfam |
PF00651.26 |
BTB/POZ domain |
0.0014 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ010166 |