MidgeBase gene description page [Pn.15206]
Outline
| Gene ID | Pn.15206 |
| Type | Protein coding gene |
| Scaffold | PnScaf28724 |
| Start | 51366 |
| End | 52726 |
| Direction | - |
Sequence
Transcript: 1155 (bp)
ATGACTTCGCTATTGAAATCAATAAAGGCTTCAACAGCCGTTCATTTGTGCTTCGCAATTTCATATTTTACAAGCGGTTTGGTCATCAACTTCTGCCAGTGTCTACTATTCTTATTCGTAAAGCCATTCAACAAAAGACTTTTCAGAAAACTGCTATACTATCTATGCTATTCGTTCCATTGTCAACTCGTCGCAATTGGCGAATGGTGGTCGGGAAGCATAGTCAAAGTTTACATTTCCAAAGAAGACTTGGCGAAAGCGGGAACTGAACATGCACTTCTCGTTATGAACCACAGTTATGAGACGGATTGGCTGTTTGGTTGGATGTTTTGCGAGAAAGTTGGGGTGCTTGGCAATTGCAAGGCCTATGCAAAGAAAGTCATTTCGCTCATCCCAACCATTGGATGGAGCTGGAAGTTTGCAGAATTTGTCTTCTTGGAGAGATCATTCGATAAGGACAAGGAAATCATTATTAAGCAGTTGAACGAAATTTTCGATTATCCTGATCCGGTGTGGCTACTATTGAATGCCGAAGGAACGCGCTTCACAAAGTCAAAACACCAGGCTTCCGTCAAGTTTGCACAGGAGAGGGGAATGGCAGTTTTGAATCATCACCTGATACCACGAACAAAAGGCTTCACTGCAAGCTTACCGGTGTTAAAGAAGAAATGCGCCGCAATTATGGATGTGCAGCTAGCTTTCGATGAGAAGGACGCAGATAAACCGACTGTTGTAAATTTACTTCGAGGAAAAAATATTACGGGACATTTGTACTTACGTCGTGTCGGCATGGAAGAAGTTCCCGAGAATGAGGAAGATGCTGCGAAGTGGCTTCAAGAACTCTTCGTTCGCAAAGACAAATTGCAGACGAGTTTCCACAAGACGGGAAATTTCTTTAAAGACACCGACATTGAGCCAATCGAGCCGATTGTATTCACGGCGAGAAAGAGCAGTCTTTTGAATTGGATTGGATGGATAGCGGTTGCATGCATCCCAATCTTGTACTTATTGTTTTCCATGATTGCTAGCGGAAAGTTATCTTACATACTGATTGGCGTTGCTATTCCTGTGGCGTTTTACATGCTCTTCAATTATGCCATTGGAACGACAAAAATAAGCCAGAGTTCGGCGTATGGCAAACAGGAGAAGAAAGAA
Protein: 385 (aa)
MTSLLKSIKASTAVHLCFAISYFTSGLVINFCQCLLFLFVKPFNKRLFRKLLYYLCYSFHCQLVAIGEWWSGSIVKVYISKEDLAKAGTEHALLVMNHSYETDWLFGWMFCEKVGVLGNCKAYAKKVISLIPTIGWSWKFAEFVFLERSFDKDKEIIIKQLNEIFDYPDPVWLLLNAEGTRFTKSKHQASVKFAQERGMAVLNHHLIPRTKGFTASLPVLKKKCAAIMDVQLAFDEKDADKPTVVNLLRGKNITGHLYLRRVGMEEVPENEEDAAKWLQELFVRKDKLQTSFHKTGNFFKDTDIEPIEPIVFTARKSSLLNWIGWIAVACIPILYLLFSMIASGKLSYILIGVAIPVAFYMLFNYAIGTTKISQSSAYGKQEKKE
| Type | Start | End | Length |
| CDS |
51369 |
51542 |
174 |
| CDS |
51629 |
52335 |
707 |
| CDS |
52395 |
52484 |
90 |
| CDS |
52543 |
52726 |
184 |
| intron |
51543 |
51628 |
86 |
| intron |
52336 |
52394 |
59 |
| intron |
52485 |
52542 |
58 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_308646 |
AGAP007113-PA [Anopheles gambiae str. PEST] gb|EAA04069.4| AGAP007113-PA [Anopheles gambiae str. PEST] |
1e-137 |
| InterPro |
IPR002123 |
Phospholipid/glycerol acyltransferase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0016746 |
transferase activity, transferring acyl groups |
|
| Pfam |
PF07331.6 |
Tripartite tricarboxylate transporter TctB family |
0.83 |
| Pfam |
PF01553.16 |
Acyltransferase |
1.2e-11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS215877PA |
| H. melpomene |
HMEL005403-PA |
| N. vitripennis |
NV12833-PA |
| D. melanogaster |
FBgn0036623 |
| H. sapiens |
ENSP00000332989 |
| M. musculus |
ENSMUSG00000001211 |
| H. sapiens |
ENSP00000414440 |
| B. mori |
BGIBMGA000425-TA |
| P. vanderplanki |
Pv.07063 |
| S. invicta |
SI2.2.0_05410 |
| A. gambiae |
AGAP007113 |
| A. aegypti |
AAEL010399 |
| S. invicta |
SI2.2.0_14269 |
| C. quinquefasciatus |
CPIJ008432 |
| P. humanus |
PHUM601620-PA |
| H. sapiens |
ENSP00000381140 |
| H. sapiens |
ENSP00000413906 |
| H. sapiens |
ENSP00000443510 |
| H. sapiens |
ENSP00000314036 |
| T. castaneum |
TC016320 |
| D. melanogaster |
FBgn0036622 |
| H. sapiens |
ENSP00000381138 |
| H. sapiens |
ENSP00000291572 |
| A. aegypti |
AAEL014026 |
| H. sapiens |
ENSP00000381135 |
| A. mellifera |
GB15767-PA |