MidgeBase gene description page [Pn.15051]
Outline
| Gene ID | Pn.15051 |
| Type | Protein coding gene |
| Scaffold | PnScaf27714 |
| Start | 63528 |
| End | 64299 |
| Direction | - |
Sequence
Transcript: 636 (bp)
ATGTCAAAAACAACAACGAAGAACTGCATTACCTTAAAAGGGTCCGCTGCAATTATCAAGGAATATTTAAACTATGGTGTAAATTCGATTCTATTTCAAAGAGGCATCTATCCGACTGAAACATTCACTCCACAGCAACAGTATGGTCTTACAATTCTAATGTCAAAGGATGAGAAAATAATAGATTTCCTAAAAAATGTACTCGGTCAAGCAGAAGGCTGGCTCGCTCAGAATAAAGTAGAGAAGTTTTCTCTGGTAATAAGTAATGTTCACACAAAGGAGGTGCTTGAGTGTTGGGACTTCAAGGTTGACCAGGAAATGCCGGAAGGGGATGAGAACAAAAGTCTCAATATTGACCCATCAAATCCACCAACTTCATCGAAAGAATTAAAGAAGATTCAACTGGAAATCGGAGCTGTTATGAGACAAATTGCTGCAACAGTCAGTTATCTTCCTTTATTGGACTGCATCTGCTCCTTCGACATTCTCATTCACACTGTGAAGGATTGCGATATTCCTGACAATTGGAACGAAACGGAAAATGTCACCATCAGAAACAAGCAAGTCGTGTGCCTCAAATCATTTTCCACTGGCTTGCAGAAAGTTGATACCATCGTGAGTTATAAAATGACCGAA
Protein: 212 (aa)
MSKTTTKNCITLKGSAAIIKEYLNYGVNSILFQRGIYPTETFTPQQQYGLTILMSKDEKIIDFLKNVLGQAEGWLAQNKVEKFSLVISNVHTKEVLECWDFKVDQEMPEGDENKSLNIDPSNPPTSSKELKKIQLEIGAVMRQIAATVSYLPLLDCICSFDILIHTVKDCDIPDNWNETENVTIRNKQVVCLKSFSTGLQKVDTIVSYKMTE
| Type | Start | End | Length |
| CDS |
63531 |
63949 |
419 |
| CDS |
64011 |
64157 |
147 |
| CDS |
64230 |
64299 |
70 |
| intron |
63950 |
64010 |
61 |
| intron |
64158 |
64229 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001850079 |
mitotic spindle checkpoint component mad2 [Culex quinquefasciatus] gb|EDS31397.1| mitotic spindle checkpoint component mad2 [Culex quinquefasciatus] |
3e-80 |
| InterPro |
IPR003511 |
DNA-binding HORMA |
|
| Pfam |
PF02301.13 |
HORMA domain |
2.5e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV16131-PA |
| A. aegypti |
AAEL008316 |
| A. gambiae |
AGAP000751 |
| B. mori |
BGIBMGA012734-TA |
| M. musculus |
ENSMUSG00000029910 |
| T. castaneum |
TC013206 |
| P. vanderplanki |
Pv.08879 |
| C. quinquefasciatus |
CPIJ008480 |
| D. plexippus |
DPOGS210080PA |
| P. humanus |
PHUM392720-PA |
| A. mellifera |
GB12183-PA |
| S. invicta |
SI2.2.0_10779 |
| H. sapiens |
ENSP00000296509 |
| H. melpomene |
HMEL006530-PA |
| D. melanogaster |
FBgn0035640 |