MidgeBase gene description page [Pn.15033]
Outline
| Gene ID | Pn.15033 |
| Type | Protein coding gene |
| Scaffold | PnScaf27709 |
| Start | 14454 |
| End | 18245 |
| Direction | - |
Sequence
Transcript: 2850 (bp)
ATGAGAATAAAGAAAGAGGGTAGTAAGCAAGTAGAGAATAAAAGCAAAAGGCCTTTCTGGAAGCTGGGATTTCGAAATTTAAAAATCACCAACAATAAAAAGTTATGGAAAAATAGTCGGGAAAAAGAAGTAATCACGCACCAAAGTAATAATTGTGTCTATTTCTCTAGCAGTGTAGTGAAAAGTCCTAAAATTCAATATCTTAAATCTGTGTATTCTGGCGACATCGAGAATAGCAAAACAAATATTTTAAACAAATTTATCCAACAAGACGAGGCAACAAAAATGGAAGCAACTGAAACACATGAGTCACAACTCGTGAAGCAAATCGACATTCTCTCATTCGAGTCAGATGAGGAAATTCTCGAGGAAACGTACGATGATAATCAGCTGGTGTTTAGCTCTCTTCAAAGTCTTTTGAATCCGGCAAACACCCTGCAGCTCTCCATCTTCATAAACTACACGCTCATACACTCGACGTCCGAGCAGATATTGTTTTACTTGATTACCGATCTGTACAGAAAAGGATGCTTGATCGACATGAAGCGATGGGCATACGAAATTTACTCAACCTTCATTGTGGATTCGGCTCCTTTGCAAATCTTTAATTCGGAGGAAAATGAAAAAATCATCAATGAGATTGACTCGAAGCTTGTCCGAGTCGAGGCATACAAGCCCGTCAACAATCTCACTTCGCCCTATGACTTTGAAATGCTGCGAATGCTTCGTGACATTTTCAAAAAATCTAGAGTTGAAGCTGAAGCTATCATCACGAATCAACTCGAAAAGTTTCAAGTGAAACGTCGAGCTGGCTTGGAGGCGTTGTATGGCGCATCAGCCGCTGACATCAAAGAGGCCAAGATGAATCGGCAAATGATGCAAAAGATTGTCGAGAAAAATCTCATGCCGAAACTGCTGATGTTTATTGAGGACGTGGAGAAGGATAAGAGCAATCAAGAGCCATACAACATCATGCTACTGTCGGCTCTGTCGACGGTAGTGCACCAAACGTTCAGTCCGAGCATTAACTACTTCGAGTCCATCGATCAGTTTGTGTCGCGCGGAAGAATGTCGATTGATCGCGAAATTTGCGCAAATGGCCACAAGTTCGTGTCGAAGGTCTTTTTCTGCGCAACCTACTGTGATTTTTGCCTCAAGTTGTTGTATGGCGTGTCGCCGCAAGGATATGAATGCAGTTGTGGAATCAAAATCCACGAGTCTTGCATCAACTCGCTCATGGGTACTTGCATTCTGCATGTCCATGACGACGACGAGGATGAAGATGAAAACGGCCTTAACATGTCAAGAGATTCCTTTAAACTCCAAGAACTCGTTCACAAGACGCTCGGAAACCAGCGAATTGAAAATTACAAACGCACAAAGGGAAATCGACCCAAATCGGATCCGGGTCTCTACACACATTCATTGGACTCGTCGTCCTCGGATGATGGTCTGGACGACACTTGGAAGAACGACCTTTCTTTGGAAATTCCAAAACTCACCGAAAAGGAGAAGATCCGCCGCGAGATCATACTGGAGCTGTTTGAAACAGAGAGGCGACACGTGAAGATCCTGAAGCTGCTGAACAACGTTTTCTTCGAACCGCTAAAGAGATCGAAGGCTCTCACGCCCGAGCTCGAGCACATTCTGTTTCCGTCGTCGTTTTTCGTCATCAAGGACTGGCATGTATCGTTCGAGGCGATGCTGAAGAAAGAGTGGCACGAACAGCACGGACTTTTACTGAATATCGGAAGCTGCTTGTCCATCTTCGAGAGCACTTACGGGAACATTCTGAAGGAGAGTGCAGCGAATTTCTGTGCGGGTCAACAAGTCGCATTGGATGCTCTGAAAGTTGCACGAAGCAAGAATGAATCTCTGCAGAGAGGATTGATAAAGGCGGAATCGCACAAAGGATGCCGACGACTGCAACTAAAGGATTTGATGCTGTCGATTTTGCAGCGACTCACGAAATACCCGCTGCTCTTTGAGAGAATCGAAAAGTACACCGAAAACGATGATCGCGAGAAGATCAAGAAGGCGATTGAGTCGTCGAAGGAAATTCTGAGTTTCGTCAACAATGCCGTGCGAAATTCGGAGGAGCTGCGACTCATTCAATCGAAACTCGATAAGCAGCAGTTCGAACGGGAAGCGCCTATTGAGTTCCGAGGCCTCAATCTCTTGAGCTACAAGTTTGTCCACAGCGGATACTTGATCATGAAGAAGGGAGCGCAGCCGATGCGTCTTTTACTCTTCGAGAAGATTCTCGTGTTGCTCTACAAGCAGGACGAGCGCTTTGTACTGAAGTGCTGTGAGAGCTTGAAATTTCCAGTCGTGAAAATTCACAACGTGATCGTTCGTCCGAACGCAACGGACAGCAGGTCCTTTTTCTTGATTTGCCAGGACGAGTCGGCCTCGCAAATGATTGAGCTCAATGCTCTCAACGAAACAGACGCACAAAATTGGATCCAAAAAATCGGCGAAACGGTTGAAAAGGCAAACAACTCGATTTCGCTGAAGCGTCGATCGTCGGCCGAGTCGGCGCAGTCTATGTTGAGAAGCGAATCCCAGCGACTGCAATTGACTAAAAACATAGATTTAGCATCGATTGCAAAGACCTTGCAAGTTCAAACAAAATATGTCGAAGAATGGGTCCAAGCGACGCAAAAGAACATGCCAAAAAAGAGTGGAGAAAATGCAGATTCGTGCGAAGTGGACAACATAAATGTGACTGTCAACACGGTCAATCGTCTCATCTCTCAACTTTCGATAAAAATTGCTGAGCGCGACCATGAGCGAGAATTGTATTTGAAGGAAAACCAAAAACTTCGTAGTCAACTTAATGTTTCAGAT
Protein: 950 (aa)
MRIKKEGSKQVENKSKRPFWKLGFRNLKITNNKKLWKNSREKEVITHQSNNCVYFSSSVVKSPKIQYLKSVYSGDIENSKTNILNKFIQQDEATKMEATETHESQLVKQIDILSFESDEEILEETYDDNQLVFSSLQSLLNPANTLQLSIFINYTLIHSTSEQILFYLITDLYRKGCLIDMKRWAYEIYSTFIVDSAPLQIFNSEENEKIINEIDSKLVRVEAYKPVNNLTSPYDFEMLRMLRDIFKKSRVEAEAIITNQLEKFQVKRRAGLEALYGASAADIKEAKMNRQMMQKIVEKNLMPKLLMFIEDVEKDKSNQEPYNIMLLSALSTVVHQTFSPSINYFESIDQFVSRGRMSIDREICANGHKFVSKVFFCATYCDFCLKLLYGVSPQGYECSCGIKIHESCINSLMGTCILHVHDDDEDEDENGLNMSRDSFKLQELVHKTLGNQRIENYKRTKGNRPKSDPGLYTHSLDSSSSDDGLDDTWKNDLSLEIPKLTEKEKIRREIILELFETERRHVKILKLLNNVFFEPLKRSKALTPELEHILFPSSFFVIKDWHVSFEAMLKKEWHEQHGLLLNIGSCLSIFESTYGNILKESAANFCAGQQVALDALKVARSKNESLQRGLIKAESHKGCRRLQLKDLMLSILQRLTKYPLLFERIEKYTENDDREKIKKAIESSKEILSFVNNAVRNSEELRLIQSKLDKQQFEREAPIEFRGLNLLSYKFVHSGYLIMKKGAQPMRLLLFEKILVLLYKQDERFVLKCCESLKFPVVKIHNVIVRPNATDSRSFFLICQDESASQMIELNALNETDAQNWIQKIGETVEKANNSISLKRRSSAESAQSMLRSESQRLQLTKNIDLASIAKTLQVQTKYVEEWVQATQKNMPKKSGENADSCEVDNINVTVNTVNRLISQLSIKIAERDHERELYLKENQKLRSQLNVSD
| Type | Start | End | Length |
| CDS |
14457 |
14540 |
84 |
| CDS |
14604 |
14910 |
307 |
| CDS |
14978 |
16018 |
1041 |
| CDS |
16092 |
16918 |
827 |
| CDS |
16981 |
17325 |
345 |
| CDS |
18000 |
18245 |
246 |
| intron |
14541 |
14603 |
63 |
| intron |
14911 |
14977 |
67 |
| intron |
16019 |
16091 |
73 |
| intron |
16919 |
16980 |
62 |
| intron |
17326 |
17999 |
674 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_318541 |
AGAP010767-PA [Anopheles gambiae str. PEST] gb|EAA13719.5| AGAP010767-PA [Anopheles gambiae str. PEST] |
9e-72 |
| InterPro |
IPR002219 |
Protein kinase C-like, phorbol ester/diacylglycerol binding |
|
| InterPro |
IPR016137 |
Regulator of G protein signalling superfamily |
|
| InterPro |
IPR011993 |
Pleckstrin homology-like domain |
|
| InterPro |
IPR015212 |
Regulator of G protein signalling-like fold |
|
| InterPro |
IPR015721 |
Rho GTP exchange factor |
|
| InterPro |
IPR000219 |
Dbl homology (DH) domain |
|
| InterPro |
IPR001849 |
Pleckstrin homology domain |
|
| Gene Ontology(BP) |
GO:0038032 |
termination of G-protein coupled receptor signaling pathway |
|
| Gene Ontology(BP) |
GO:0035556 |
intracellular signal transduction |
|
| Gene Ontology(BP) |
GO:0035023 |
regulation of Rho protein signal transduction |
|
| Gene Ontology(CC) |
GO:0005622 |
intracellular |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0005543 |
phospholipid binding |
|
| Gene Ontology(MF) |
GO:0005089 |
Rho guanyl-nucleotide exchange factor activity |
|
| Pfam |
PF00621.15 |
RhoGEF domain |
1.1e-30 |
| Pfam |
PF13475.1 |
Domain of unknown function (DUF4116) |
0.94 |
| Pfam |
PF00130.17 |
Phorbol esters/diacylglycerol binding domain (C1 domain) |
8.9e-05 |
| Pfam |
PF09128.6 |
Regulator of G protein signalling-like domain |
1.4e-20 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.15500 |