MidgeBase gene description page [Pn.14947]
Outline
| Gene ID | Pn.14947 |
| Type | Protein coding gene |
| Scaffold | PnScaf27075 |
| Start | 1253 |
| End | 4230 |
| Direction | + |
Sequence
Transcript: 963 (bp)
ATGTCTAAAGGAATAACAAATTCGATGGAAATGGAAGAGCCTTTCTACGTTCGCCGCAAGCCAGATCCTATTCCATTCAGTAAATTTCTCTATAACCGGGAAAAGGGTACTGTAATGGGCAGAACTGGTTTAAGCTGGGCAAAAATCGGATTTTTCTACACTATTTTTTATGGCGTGCTCGCTGCACTTGTTGCTGTTTGTATGTGGGTATTTTTGCAAACACTCGATCCTCGCATACCTAAATGGCAACTGCACGAGTCTCTTATTGGAACCAACCCGGGTTTGGGTTTCCGACCATTGCCACCAGAAGATAACGTTGAGAGCACATTGATCTGGTATAGGGGAACAAATAAAGAGAATTATGAAGTGTGGACAAACGCTTTAGACGAGTTTTTGCTTCCTTACAAGACACCTGGTTCTATTTCTGGTCGAGGTCAAAACATTTACAATTGCGACTATGGACAAGAACCTCCACGTGGTCAAGTTTGCGATGTCGACATCAAGTCATGGTCTCCATGTATTCAAGAGAACGCCTATAACTATCACCGCAGCGCACCTTGCATCTTTCTGAAACTCAACAAAATATTTGCTTGGATTCCCCATTATTATAACAGCTCTGACAATCTTCCAGATAACATGCCGAAAGATTTAGTAGAACATATCAATCGCACTGCCACTCTAGAGCCACACACCATGAATACAATATGGGTATCTTGCGAGGGTGAAAATCCAGCGGATCTTGAGAATATTGGACCTATTGAGTACTTTCCACGACGAGGATTCCCAGGGTTTTACTTCCCCTATGAAAATTCTGAAGGCTACTTATCGCCACTTGTAGCTGTGCATTTCAAGCGACCAGTTCGTGGAATAATTATCAATGTTGAATGCAAGGCATGGGCTAAGAATATTAAGCACGACCGTGCCGATAGAATAGGATCCGTGCATTTCGAATTGATGATTGAC
Protein: 321 (aa)
MSKGITNSMEMEEPFYVRRKPDPIPFSKFLYNREKGTVMGRTGLSWAKIGFFYTIFYGVLAALVAVCMWVFLQTLDPRIPKWQLHESLIGTNPGLGFRPLPPEDNVESTLIWYRGTNKENYEVWTNALDEFLLPYKTPGSISGRGQNIYNCDYGQEPPRGQVCDVDIKSWSPCIQENAYNYHRSAPCIFLKLNKIFAWIPHYYNSSDNLPDNMPKDLVEHINRTATLEPHTMNTIWVSCEGENPADLENIGPIEYFPRRGFPGFYFPYENSEGYLSPLVAVHFKRPVRGIIINVECKAWAKNIKHDRADRIGSVHFELMID
| Type | Start | End | Length |
| CDS |
1253 |
1391 |
139 |
| CDS |
2682 |
2822 |
141 |
| CDS |
2943 |
3062 |
120 |
| CDS |
3463 |
3755 |
293 |
| CDS |
3886 |
4054 |
169 |
| CDS |
4127 |
4227 |
101 |
| intron |
1392 |
2681 |
1290 |
| intron |
2823 |
2942 |
120 |
| intron |
3063 |
3462 |
400 |
| intron |
3756 |
3885 |
130 |
| intron |
4055 |
4126 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654267 |
sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] gb|EAT37925.1| sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] |
1e-143 |
| InterPro |
IPR000402 |
ATPase, P-type cation exchange, beta subunit |
|
| Gene Ontology(BP) |
GO:0046034 |
ATP metabolic process |
|
| Gene Ontology(BP) |
GO:0006813 |
potassium ion transport |
|
| Gene Ontology(BP) |
GO:0006814 |
sodium ion transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005391 |
sodium:potassium-exchanging ATPase activity |
|
| Pfam |
PF00287.13 |
Sodium / potassium ATPase beta chain |
4.8e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL013094-PA |
| D. plexippus |
DPOGS201847PA |
| C. quinquefasciatus |
CPIJ801531 |
| S. invicta |
SI2.2.0_03764 |
| H. melpomene |
HMEL013096-PA |
| A. aegypti |
AAEL010145 |
| B. mori |
BGIBMGA006099-TA |
| P. vanderplanki |
Pv.01511 |
| T. castaneum |
TC014030 |
| D. plexippus |
DPOGS201880PA |
| B. mori |
BGIBMGA006057-TA |
| D. melanogaster |
FBgn0015777 |
| P. humanus |
PHUM411340-PA |
| N. vitripennis |
NV13201-PA |
| P. humanus |
PHUM583290-PA |
| A. mellifera |
GB15097-PA |
| A. gambiae |
AGAP007791 |