MidgeBase gene description page [Pn.14928]
Outline
| Gene ID | Pn.14928 |
| Type | Protein coding gene |
| Scaffold | PnScaf26969 |
| Start | 805 |
| End | 3785 |
| Direction | - |
Sequence
Transcript: 2769 (bp)
ATGGAAGAAGAACCCAAAATTGAAGACGTTTTAAAAAAAATCTACGATTTATATTGCAATCCAGATATTACAAAAAAGGAACCCGCTTCAAAATACCTAGCTCAATTGCAGGACTCGGTTCACTCTTGGAAAGTGGCAGACCAACTACTCCTTCAAAAAAATGACATGCATTCATGTTACTATGCCGCTCAGACGCTCCGAAGCAAGATTCAACATTCATTTCATGAACTACATGAATCTGACTACTCATCTTTACGTGATTCGATTATGACCCATATAGAGCATATTACGCCCGAAACCAATCCAACAATAGCAAAACAACTATGTTTAGCGCTCGCCGATTTACTTTTGCTGATGGCATCGTGGCATAAGCCTGTTGAAAATCTCATAGCAAGGTTCTCTCAGAACACCGATTCCATCCAGCCTTTATTGATGTTACTCACATTCATACCGGAAGAAATCGATGCTCGCTACTTGAGAATCGGCGAGAACCGAAGAAAACAAATTCTCAATGAACTTGACTCGAGTTCTGCTATAATACTCAACTTTCTTCATTCATGCTTAATGATCAACGACTCATCTATTCTTCAACATATTTATGTTGACATTATACAGTGTTTTACTGCATGGGTGAAAATGGACTGCATAAGTCTTAACGACGCTGCAAATTCTACTGTTTTCATATACGCGTTCAAAATTCTACAAAGCCCACCGGCAACGACAAACGAAAAACAGCTAGAAGTTGCTTCTGATTGTGTTTGTGCTATTCTTGAAACAATTGTTCTTGAACGAACATCTGAAGAAATTGAGAAAAACATATTTATGGGAATTTTGCAACTGGAACATGCTTATCATGAAGCAGTGGCGCAAGAAGATGCAGACAAGTGCATGGTTTTATGCAGAATCTTTACCGTGATGGCAGAAACGTACTTGCCGCGATTCGTTAATTCAAGCACGCAGTCAGGTCCACATTACACTATAAAGGCTCTAGATGTATTAATATCGTGCGTGAGTCATTTTGACTTTGAACTTGCGCAAATTACCTTCTCAGTTTGGTATAAATTAAGTGAAGAGCTCTATCAGAAGAACGATGATAGTTTAACGGCGATATTTGAAACTTATATAGAACGGCTGATCGAAGCACTTTTCAAACATTGTCAATTGGACGCTGATCACGAAGGCTTAATCAATGAAGATGATGCGTTTTCTGATTTTCGTTTTAAAGTTTCGGAACTCATTAAAGATGTTTCCTTCATAGTACTGAGTAAAAATTGCTTTCAGCATATGTTTAATATTCTACAAAGCCCAAATGTCACATGGGAAGCAACTGAAGCTGCACTATTCATTATGGAAAGTGTAGCTCGCAATTTAGACGTGAAGGAGGATAAAATTGTACCCAAAGTTCTTGAAGCAATTCTCAATCTACCAGAAAGTTGCCACATAGCCATAAGATACACGTCTGTCAATATTTTGGGACAATTATGTGATTGGATTGCTGCTCATCCCACGACGCTTGAAGTTGTTCTTAATTTCTTGCTTGGAGCACTTCAAAAGAAAGCTGGACTCGCGTCTGCTGCTGCTCAATCTCTTCAGTTGATATGCTCCTCAAGTCACAAGGATATGATTAATCACGTGAGTGGACTCTTAGAAATTACAAGATGCTTGGAAATGTTTGAAGTTCAGCCTAACGCGGCAATCACTTTATTGAAAGGAATTTCACAAACTGTTAGCCGTCTACCATACGAACAATTCACTGATGTCATGCGACAATTGTGCAATTTTCAAATTGCTCATCTTTGTATGCTCATGGAGAGCGATGAGAAAAAGGATCCTACGCAGTGGATAGACAGATTAGCTGCAATATATCGTAATATGAGTCCCAGAGTAGGAGCAAACGAAATAAATCCAGCGACAGTTGTAATAGTGGAAAATTGGCAAGTGCTTTCGAGATTGCTGGAGCACTATAAGAATAATGAGAAGGTTATAGAGAGAATCGTGCGATGTATTCGCTATGGTGTTCGATGTATTTCACACGAGTCTTTGCCAATTTTAGAGTCACTTGTAACTCAAATGGTTAGCGTTTATTCATCTGAAAAACACAGTTGTTTGCTCTATCTTGGCAGTATTCTAGTCGATGAATTTGGAAGTGATATAAGATGCACGACTGGGCTATTAAACATGCTTGAAGCGTTCATTGAACCGACATTCACTGTTTTGCAAGCTGAAAATGGGTTAAAAAATAATCCGGACACGGTCGACGATTTCTTTCGGTTGGTAGTCAGATTTATTCAACGTATGCCCCTCAATTTTCTACAAAGTCAGCTTGTAACACCGATAATTCAATGTGCAATTCTAGCATGTACGTTGGATCATCGCGATGCGAACATGTCGGTGATGAAATTCCTTTCGAACTTATTGTCACACGGAAAGGTGAATGGTGATCCTGCTATAAGACCTTATGTTCAAAACATTGTACAAATCAATGGTGAAACCCTTGTCAGCAATCTTATTTACTCATCCGTATTTTATCTGCATTCTAACATGCTTGAAGATGTTGTTGACGTCTTAATGGAGATAAAATTCATAAACAATGAAATTTTTTCGGAAGCGTTGCAAAAAGCTCTGAATCAACTGCCCAGGAAAAACGTCGGTGGTTCTGAAACTGCAACTAATGAGCAATTAAGCAAGTTTTATCAAAACCTTACAAAAACAAATATTAGTACCCGTCAAATGACTCATGAGCTTCAAGAATTTTGTCGACTTTTTCGT
Protein: 923 (aa)
MEEEPKIEDVLKKIYDLYCNPDITKKEPASKYLAQLQDSVHSWKVADQLLLQKNDMHSCYYAAQTLRSKIQHSFHELHESDYSSLRDSIMTHIEHITPETNPTIAKQLCLALADLLLLMASWHKPVENLIARFSQNTDSIQPLLMLLTFIPEEIDARYLRIGENRRKQILNELDSSSAIILNFLHSCLMINDSSILQHIYVDIIQCFTAWVKMDCISLNDAANSTVFIYAFKILQSPPATTNEKQLEVASDCVCAILETIVLERTSEEIEKNIFMGILQLEHAYHEAVAQEDADKCMVLCRIFTVMAETYLPRFVNSSTQSGPHYTIKALDVLISCVSHFDFELAQITFSVWYKLSEELYQKNDDSLTAIFETYIERLIEALFKHCQLDADHEGLINEDDAFSDFRFKVSELIKDVSFIVLSKNCFQHMFNILQSPNVTWEATEAALFIMESVARNLDVKEDKIVPKVLEAILNLPESCHIAIRYTSVNILGQLCDWIAAHPTTLEVVLNFLLGALQKKAGLASAAAQSLQLICSSSHKDMINHVSGLLEITRCLEMFEVQPNAAITLLKGISQTVSRLPYEQFTDVMRQLCNFQIAHLCMLMESDEKKDPTQWIDRLAAIYRNMSPRVGANEINPATVVIVENWQVLSRLLEHYKNNEKVIERIVRCIRYGVRCISHESLPILESLVTQMVSVYSSEKHSCLLYLGSILVDEFGSDIRCTTGLLNMLEAFIEPTFTVLQAENGLKNNPDTVDDFFRLVVRFIQRMPLNFLQSQLVTPIIQCAILACTLDHRDANMSVMKFLSNLLSHGKVNGDPAIRPYVQNIVQINGETLVSNLIYSSVFYLHSNMLEDVVDVLMEIKFINNEIFSEALQKALNQLPRKNVGGSETATNEQLSKFYQNLTKTNISTRQMTHELQEFCRLFR
| Type | Start | End | Length |
| CDS |
808 |
868 |
61 |
| CDS |
934 |
2432 |
1499 |
| CDS |
2499 |
3590 |
1092 |
| CDS |
3669 |
3785 |
117 |
| intron |
869 |
933 |
65 |
| intron |
2433 |
2498 |
66 |
| intron |
3591 |
3668 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663941 |
transportin [Aedes aegypti] gb|EAT45133.1| transportin [Aedes aegypti] |
0.0 |
| InterPro |
IPR001494 |
Importin-beta, N-terminal |
|
| InterPro |
IPR011989 |
Armadillo-like helical |
|
| InterPro |
IPR013598 |
Exportin-1/Importin-beta-like |
|
| InterPro |
IPR016024 |
Armadillo-type fold |
|
| Gene Ontology(BP) |
GO:0006886 |
intracellular protein transport |
|
| Gene Ontology(MF) |
GO:0008565 |
protein transporter activity |
|
| Gene Ontology(MF) |
GO:0005488 |
binding |
|
| Pfam |
PF08389.7 |
Exportin 1-like protein |
1.3e-18 |
| Pfam |
PF03810.14 |
Importin-beta N-terminal domain |
7.9e-07 |
| Pfam |
PF14327.1 |
Hinge domain of cleavage stimulation factor subunit 2 |
0.057 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS202847PA |
| S. invicta |
SI2.2.0_06635 |
| H. sapiens |
ENSP00000418646 |
| P. vanderplanki |
Pv.00966 |
| P. humanus |
PHUM401850-PA |
| S. invicta |
SI2.2.0_14591 |
| A. mellifera |
GB17583-PA |
| A. gambiae |
AGAP003576 |
| C. quinquefasciatus |
CPIJ010425 |
| B. mori |
BGIBMGA008825-TA |
| N. vitripennis |
NV11356-PA |
| D. melanogaster |
FBgn0031456 |
| T. castaneum |
TC007765 |
| H. sapiens |
ENSP00000418267 |
| H. sapiens |
ENSP00000420089 |
| M. musculus |
ENSMUSG00000012535 |
| H. melpomene |
HMEL002684-PA |
| H. sapiens |
ENSP00000376936 |
| A. aegypti |
AAEL003573 |
| H. sapiens |
ENSP00000265388 |