MidgeBase gene description page [Pn.14903]
Outline
| Gene ID | Pn.14903 |
| Type | Protein coding gene |
| Scaffold | PnScaf26799 |
| Start | 51 |
| End | 3263 |
| Direction | + |
Sequence
Transcript: 2253 (bp)
ATGTCGGAAGCTATGGAGATTGATTTGAAGTGCGCGGAAAAGGTGACCGACTCCGATGTCGAGTCGAATGCCGAAGACAAAGAGAAGGGCTATCACAAGGCAGATCACATGTATGGCGACATGACGAGAAAGCCAAAGCCGATCAATCCACTGCATCAGAGCGAGCAATCGTTGTACTCTCCCATGCCGATATATCCTTACAGCAGTCCCAAAAATCCAATTGGTGTAATGCCATTCCAACCTAAAGGCGGCGCATTCAGAACGATGCCTCAGAGTCCAAAGACATGCGGAATAATTCAGTCGACGCCGACGATAAAGATCAAGGCCGAATTGGAGGCGAAATGCTTGTCGGCCAATAGCACAAACAATAATAACACAATTTTCAATTTTCCAACTGTGCAATCGACGAGTGTTAGTGGTAGTAGTGGTGGTAATAACAGTGCGACAACAACAACTACAACAACAATGGCTGAAAACGACGGTGCAATAAGAAAAGGTGATCAAACAGCCGGTGGTAAACATCATGAAGGTTATTATGATGCCATCAAACTGGAGGACAATGGCACAACTGCAATTATCTACGAGACTATCGTCATTGAGAATCCAGCGCCAGCGACCACGACTACCGCTACGCACCACGCTAGTCAGGAGATTTTGGGCTTAGTGTCGAGCGGCAGCAATACTAGTTTTATTAATAATACCATTAACAACAACAATAAGTTTATTACTAACAAAAATCATATTGCTACACTGGAGGCCGTAGGCAGTGCCTCGTCGTCGACGGTGAGCAATAGTAGTGGTGGTGGCGGCGGAGGAGGAGGAGGAGGGATTATTGTTCTAACTGGATCATTGAATGAATTGTTGTTAAATCAAAATGGTCATGTGGTTACTAATACACAGCTGCTTTGTCAGAATAATGGCACATCAGCAATTGGAGACGCTTCGGGACAGATGAACGCTCTCGGCAATCAGCAGCAATCAATTATGGTCTCTATTAATCCCAATCAACAGGATGAGTATGTCATGTACCAAAAATCCGGTTCGCATCAATCGTCTGGCATGAAACAACCGCCTACGTATGTCATTCAGAGTTCGAAAGTGCCGACAGTTTACGTGCAGCAAGCATTTGACGCCTCAACAGCGTCCGGCGGGCTCAAAATCAAGGAAGAACCCGAGTCGCCGACAGTGAGAAACAACTTGCCAGCAACTCCGAAATCCAATGAAGCTCAGTCCAACGACGCCGAAGGAGGAAACGATCAAAATGAGGGTGGCGATGCTGAGAGCTACTGTGCGGAAAGCAAAAAGTTCATCTTGGCTCCAACTCCTGCGCAGTTAGGCAAAGCTCCTCTGCAGAGACGTCAAAATCAGACTGTGAACTCATCAAACTCAAACCAAAACGTCTCGGAAATGACAACATTCATCGACTCGTCAGGATCTCTAAATGTCGTTCCGTCTGCTCTGCCAACACCCACATCTGCGCCATATGACGTTGACGCTCAAATGTCGCCATCTATCAAGTCGAAGTCGTACAAGAAAATCAAGACCGATGACATGGACAATGTCCTGAGACAAGTTGATTTCGAGAACAAATTCAAGATTCTTCCTCAATTCAAACCGGAAGACTGTCAATCGCCGAGCGCAATCTCTGTGCCATCGTCACCAAGAGTTTTCACACAAAGCTATCGAAAGAAGCAGCAGCAGCAGCAACAGCAGCAACAACAGCAACAGCAGCAGTTACAGCAGTCTATCCCGAAGAGTGCAGTTCCGACAGATGACGAGCAATCAGATTTGGGAAGCGCAATCTCCACAGCCACTCCATCGTACCTCATGGGAAATCGATTCTTTGGACCTGATTTTAACATCGATCAGTTGAGATATTGTGTGAATGCAGTTTTAGCGGCAGAAGACAACTCCGACCGCTCGCCTCGGACACCGAAAACGCCGTCGCAAAGATCTGATGCAAACGAAAAGGGCCATCGAAAGATTCTGGAAGAGCGCAGACGATTGGTCATGGAACTATTTCAGCAGCATGGAATGTTTCCTTCATCGCAGGCAACCAACACGTTTCAGATTGAACACAGCAACATTTTTCCAAACAAGCAAAGTCTTCAGTTGAAAATTCGCGAAGTACGCCAGAAATACATGGCACAGCCCGGTTTCAATACACAGCACCAGCAACCGTACACTCCGAACGATAATCTACAAAGCAACGTGTCTTCGACCGAGCAGTCAACGGGAGTGACAGCGGCGCAG
Protein: 751 (aa)
MSEAMEIDLKCAEKVTDSDVESNAEDKEKGYHKADHMYGDMTRKPKPINPLHQSEQSLYSPMPIYPYSSPKNPIGVMPFQPKGGAFRTMPQSPKTCGIIQSTPTIKIKAELEAKCLSANSTNNNNTIFNFPTVQSTSVSGSSGGNNSATTTTTTTMAENDGAIRKGDQTAGGKHHEGYYDAIKLEDNGTTAIIYETIVIENPAPATTTTATHHASQEILGLVSSGSNTSFINNTINNNNKFITNKNHIATLEAVGSASSSTVSNSSGGGGGGGGGGIIVLTGSLNELLLNQNGHVVTNTQLLCQNNGTSAIGDASGQMNALGNQQQSIMVSINPNQQDEYVMYQKSGSHQSSGMKQPPTYVIQSSKVPTVYVQQAFDASTASGGLKIKEEPESPTVRNNLPATPKSNEAQSNDAEGGNDQNEGGDAESYCAESKKFILAPTPAQLGKAPLQRRQNQTVNSSNSNQNVSEMTTFIDSSGSLNVVPSALPTPTSAPYDVDAQMSPSIKSKSYKKIKTDDMDNVLRQVDFENKFKILPQFKPEDCQSPSAISVPSSPRVFTQSYRKKQQQQQQQQQQQQQQLQQSIPKSAVPTDDEQSDLGSAISTATPSYLMGNRFFGPDFNIDQLRYCVNAVLAAEDNSDRSPRTPKTPSQRSDANEKGHRKILEERRRLVMELFQQHGMFPSSQATNTFQIEHSNIFPNKQSLQLKIREVRQKYMAQPGFNTQHQQPYTPNDNLQSNVSSTEQSTGVTAAQ
| Type | Start | End | Length |
| CDS |
51 |
137 |
87 |
| CDS |
203 |
362 |
160 |
| CDS |
429 |
710 |
282 |
| CDS |
960 |
1352 |
393 |
| CDS |
1428 |
1516 |
89 |
| CDS |
1608 |
1965 |
358 |
| CDS |
2043 |
2232 |
190 |
| CDS |
2292 |
2494 |
203 |
| CDS |
2563 |
2676 |
114 |
| CDS |
2736 |
2929 |
194 |
| CDS |
3012 |
3153 |
142 |
| CDS |
3220 |
3260 |
41 |
| intron |
138 |
202 |
65 |
| intron |
363 |
428 |
66 |
| intron |
711 |
959 |
249 |
| intron |
1353 |
1427 |
75 |
| intron |
1517 |
1607 |
91 |
| intron |
1966 |
2042 |
77 |
| intron |
2233 |
2291 |
59 |
| intron |
2495 |
2562 |
68 |
| intron |
2677 |
2735 |
59 |
| intron |
2930 |
3011 |
82 |
| intron |
3154 |
3219 |
66 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001649010 |
capicua protein [Aedes aegypti] gb|EAT44266.1| capicua protein [Aedes aegypti] |
3e-89 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ012202 |
| A. aegypti |
AAEL004381 |
| C. quinquefasciatus |
CPIJ016184 |
| A. gambiae |
AGAP013411 |