MidgeBase gene description page [Pn.14902]
Outline
| Gene ID | Pn.14902 |
| Type | Protein coding gene |
| Scaffold | PnScaf26780 |
| Start | 1701 |
| End | 3178 |
| Direction | + |
Sequence
Transcript: 969 (bp)
ATGGAGTACCTGGACATCGTGAAGGAGATCAAGACGACGGCGGAGAACCCGGTCGGCATGGCCGAGGTGTTCGGCGACCGGCTGTTTGTGCGGCCGAAGGACGCCAAGTTCCGCAACTTCCCGTCGTCGGTGCAGAGCAAGGCGTTCCTCGAGGACGTCAAGCGCACCAAGAACTTCAAGGTCTACGAGGACGACGTGTGGCTCATCGGCTTCCCGCGCAGCGGAACGACGCTCATGCAGGAGATGCTCTGGCTCATCGTCAACAACTACAACTACGAGGCGGCCAAGTCCAAGGACACCTACAACCGCGCACAGTGGTTCGAATACTTCAACCTTATGCACAAGCTGCAAGGCGTCCCTTACGACTACCAGGACAACATGCCACGCCCGCGCGTGTTCAAGACCCACATGCCGGTCGAGTACTTGCCGGACCAAATCTGGACGGTCAAGCCCAAGATGGTGCACATTTGCCGTGACATCAAGGACGTCGCCATTTCGACATACTACTGGCGCAAGAATTCGGTTCACGACGACGTCGGCACGATCGAAGAACACTTCGAGGACATTCTGAGCGATAGGATGTGGTACTCGCCCTACCGCCAGCATGTCCTCAACTACAAGAGCATCCCGGACTACCCGAACATCCTCTACGTGACCTACGAGGAGGTCGTCGGCGACAAGCCCGGCACTATTAAAAAAGTCGCCGAATTTCTCGGCAAGCCGATCAGCGACGAAAACCTCAAGTCACTCCTCGACCACCTCAGCTTTGACAAAATGAAGCAGAGCAAGGCAACCAACATGCAGCACTATCTGGAGCAGTTCAACGCGATTTCGAACCACGACCGCCCGGTGACCGAGTTCATCCGCAAGGGCATCGTCGGCGACCACAAGAACCAGATGAGCCCAGAGACGATCAAGCGCTTCGACGACTGGATGGCGCAGGCAGCGACCCTCAAGTCGAACTTCGAG
Protein: 323 (aa)
MEYLDIVKEIKTTAENPVGMAEVFGDRLFVRPKDAKFRNFPSSVQSKAFLEDVKRTKNFKVYEDDVWLIGFPRSGTTLMQEMLWLIVNNYNYEAAKSKDTYNRAQWFEYFNLMHKLQGVPYDYQDNMPRPRVFKTHMPVEYLPDQIWTVKPKMVHICRDIKDVAISTYYWRKNSVHDDVGTIEEHFEDILSDRMWYSPYRQHVLNYKSIPDYPNILYVTYEEVVGDKPGTIKKVAEFLGKPISDENLKSLLDHLSFDKMKQSKATNMQHYLEQFNAISNHDRPVTEFIRKGIVGDHKNQMSPETIKRFDDWMAQAATLKSNFE
| Type | Start | End | Length |
| CDS |
1701 |
2023 |
323 |
| CDS |
2288 |
2570 |
283 |
| CDS |
2667 |
2841 |
175 |
| CDS |
2988 |
3175 |
188 |
| intron |
2024 |
2287 |
264 |
| intron |
2571 |
2666 |
96 |
| intron |
2842 |
2987 |
146 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_309706 |
AGAP010987-PA [Anopheles gambiae str. PEST] gb|EAA05552.4| AGAP010987-PA [Anopheles gambiae str. PEST] |
2e-49 |
| InterPro |
IPR000863 |
Sulfotransferase domain |
|
| Gene Ontology(MF) |
GO:0008146 |
sulfotransferase activity |
|
| Pfam |
PF13469.1 |
Sulfotransferase family |
0.001 |
| Pfam |
PF00685.22 |
Sulfotransferase domain |
1e-59 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.10646 |
| Pn.11488 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02802 |
| P. vanderplanki |
Pv.12026 |