MidgeBase gene description page [Pn.14878]
Outline
| Gene ID | Pn.14878 |
| Type | Protein coding gene |
| Scaffold | PnScaf26655 |
| Start | 1366 |
| End | 2372 |
| Direction | - |
Sequence
Transcript: 870 (bp)
ATGAAGACTGAAGCACTATTAATTTTCCAAATCATCAATTTGGCATTCTCATTTGTTTTAAATGACAGAGTAGACGACAGCGGAGTCTCGAGCAGAATCATACACGGAAATGAGGCTGTGCCTCATTCCTATCCTTGGCAGTGTGGTCTGATCACGTCAAGAGTAGATTTTCCTGGACTAAGCTCGATCTGCGGCGGCGGTATCTTATCGAAGGATTTTGTGCTTACGTCGGCATTATGCCTTCAAAACACAAGCCAGACTTTGGTTATTGCTGGCGCCCACCGAATGTTTGATTTCGAGCCCACTCATCAGCGCTTTTACGTCGACAGCTCAGACTACATCATTCATCCCGACTATAATCCAGAATTTATGTCTTATGACATTGCACTGTTGCGACTTGCAACACCAGCAGTTTTTAATGATTATGTTCAGCCGATCGCGTTGCCGCCATCGGAGCTATTAGACAACGATTTTGTAGGGCAAGAGGTCCAATCCGCAGGTTGGGGAAGATTTAGCGATTGGACGGGATCCGGGTCAGAGGTCCTAAGAGTTACACGAAATTTCGTCATTGAGACAAACAGATGCAGTGGATATTTCGGAAGACTCGTATCGAACGTTACAATGTGCTTGGAAACGTACAAATCGCGCAGATCGACGTGTCGTGGAGATCATGGCTCGCCAATAGTGTGGAAAGAAAATGAATCTTCACAGCTTTACGTCGCTGGAGTCGTGAGCTTCGGCGTTTGGGTATTCAATTTCGGTTGCGATCCTCAAGCAAATAATTATATTCCGACTGTCAACACTCTAATTACTCATTTCGTTCCTTGGATTAATGAACACCTTGCTACAACAGAGCAAAATAAAAATAAA
Protein: 290 (aa)
MKTEALLIFQIINLAFSFVLNDRVDDSGVSSRIIHGNEAVPHSYPWQCGLITSRVDFPGLSSICGGGILSKDFVLTSALCLQNTSQTLVIAGAHRMFDFEPTHQRFYVDSSDYIIHPDYNPEFMSYDIALLRLATPAVFNDYVQPIALPPSELLDNDFVGQEVQSAGWGRFSDWTGSGSEVLRVTRNFVIETNRCSGYFGRLVSNVTMCLETYKSRRSTCRGDHGSPIVWKENESSQLYVAGVVSFGVWVFNFGCDPQANNYIPTVNTLITHFVPWINEHLATTEQNKNK
| Type | Start | End | Length |
| CDS |
1369 |
1582 |
214 |
| CDS |
1649 |
1805 |
157 |
| CDS |
1874 |
2372 |
499 |
| intron |
1583 |
1648 |
66 |
| intron |
1806 |
1873 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_308550 |
AGAP007252-PA [Anopheles gambiae str. PEST] gb|EAA04766.4| AGAP007252-PA [Anopheles gambiae str. PEST] |
2e-34 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF09342.6 |
Domain of unknown function (DUF1986) |
0.013 |
| Pfam |
PF00089.21 |
Trypsin |
1.1e-42 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.15247 |