MidgeBase gene description page [Pn.14841]
Outline
| Gene ID | Pn.14841 |
| Type | Protein coding gene |
| Scaffold | PnScaf26277 |
| Start | 10832 |
| End | 13246 |
| Direction | - |
Sequence
Transcript: 1947 (bp)
ATGGTATTTAGAATATTAACACATATGCAGAGTCTAATTCAGTGCCAAAGAGTGCAGATACTGCTCGTACATGAAGCATCCAAAGGAAGTTTTTCGCGCGTATTCGATTTTGAAGCTAATGATGATCTCAATGAAAGAACTAGTCCGTTTGAATCGCGATTTCCAATTAACATTGGTATCACAGGTCATGTCGCAGCAACTGGTGAAACAGTTTCAATTCCCCATGCGTATGACGATCCACGTTTTGATGCCAGCGTTGATGAGAATTCAACATTCAAGCATAAATCAATTTTGTGTATGGCTATAAAGAACTCGCTCGGTCAAATCATTGGCGTTATACAGCTCATCAATAAATTTGATGATTTAATTTTCACCAAGAACGACGAAAATTTTGTGGAGGCTTTTGCAATATTTTGCGGCATGGGCATTCACAATACGCATATGTACGAAAAGGCAATTGTTGCGATGGCTAAACAGAGTGTAACGCTTGAAGTTCTTAGTTATCACGCATCGGCATCAACAGATGATGCAATGCGACTGATGCGTCAGAAAATTCCATCTTCAGCATATTTCCAACTTCATGACTTTTCATTTGACGATCTGAGTTTGGAAGACGATGACACGCTGAAAGCGTGCTTACGAATGTTCCTCGATTTAGATCTCGTTGAGCGCTTTCACATTGATTATGAGATGCTGTGTCGATGGCTATTGAGTGTAAAAAAGAACTATCGGAACGTTACTTATCACAATTGGCGTCATGCATTTAATGTCTGCCAGATGATGTTTGCTATCCTCACATCGACGCAATGGTGGAAGGTTTTCGGTGAAATTGAGTGCCTTGCATTAATGATCGGCTGCTTGGGACATGATCTCGATCATCGTGGAGTGAACAATGCCTTTCAAATCAAGGCATCGTCGCCACTTGCACAACTCTATTCGACTTCAACGATGGAACACCATCACTTTGACCAGTGCGTTATGATTCTCAACAGTCCGGGAAATCAGATCCTGTCAAATTTATCCTCTGAAGACTATAGTCGTGTGATAAGATTGCTTGAAGACGCAATTCTCTCAACGGACTTAGCTGTCTACTTTAGAAAGCGAGGTCCATTTTTGAATTTATTAAAGAACCAAACAAACGTGTGTGACCAATTTACAAGTGAAGAGAATCGTTCACTGCTGAGAGCTATGAGTATGACGGTTTGTGATTTGTCAGCAATCACTAAACCATGGGAAATCGAGAAACGAGTTGCCGATCTTGTAAGTTCTGAGTTTTTTGAACAAGGTGATATGGAGAGACACGAGCTTAATATTACACCTATCGATATCATGAACCGTGAAAAGGAAGATCAACTACCAATGATGCAAGTTGGTTTTATTGACTCAATATGCTTACCAATTTATGAGGCTTTTGCTGACTTATCAAAGGATTTAAAACCATTAGTGGAAGGTGTGAAGGACAACAAGCAACACTGGCTTGAACTCGCTCAAACAGCTCAGGAAACGATGAAAAATCGTAAGAATAGTTTGAAATCAATTTCGAATGGGAGCATAATCAACAACAATAATAGTAATATTAATAATAACAACTATTATACGAACATAAATACCAATAATAATAATAATAATGATACCAACATTAATAATACTATCAGCAGCAACAACAAAAACCACAATAATAATATTAATAATAATAATAATAATAATAACAACAACAACAACAGTGGAGATGAGCTAAGCAATGCTAGTAACGATAGCCTGAAGATGTCTAAAATAGTAGGAAAATTTCCTTTAGATATCAACGGTATCACTTCAGTCAATTCAATATTCTCACCAACCTACATCAAGCCTCCTTCGCAAAATGGCTTCATTAACTCTTACAAGTCGTCTGCAATAGTACGATTAGATAGCTGGAAAAAGAAGGAGAGTGAAGAAGTTATGGACCAA
Protein: 649 (aa)
MVFRILTHMQSLIQCQRVQILLVHEASKGSFSRVFDFEANDDLNERTSPFESRFPINIGITGHVAATGETVSIPHAYDDPRFDASVDENSTFKHKSILCMAIKNSLGQIIGVIQLINKFDDLIFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASASTDDAMRLMRQKIPSSAYFQLHDFSFDDLSLEDDDTLKACLRMFLDLDLVERFHIDYEMLCRWLLSVKKNYRNVTYHNWRHAFNVCQMMFAILTSTQWWKVFGEIECLALMIGCLGHDLDHRGVNNAFQIKASSPLAQLYSTSTMEHHHFDQCVMILNSPGNQILSNLSSEDYSRVIRLLEDAILSTDLAVYFRKRGPFLNLLKNQTNVCDQFTSEENRSLLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMERHELNITPIDIMNREKEDQLPMMQVGFIDSICLPIYEAFADLSKDLKPLVEGVKDNKQHWLELAQTAQETMKNRKNSLKSISNGSIINNNNSNINNNNYYTNINTNNNNNNDTNINNTISSNNKNHNNNINNNNNNNNNNNNSGDELSNASNDSLKMSKIVGKFPLDINGITSVNSIFSPTYIKPPSQNGFINSYKSSAIVRLDSWKKKESEEVMDQ
| Type | Start | End | Length |
| CDS |
10835 |
11374 |
540 |
| CDS |
11446 |
11755 |
310 |
| CDS |
11831 |
12019 |
189 |
| CDS |
12097 |
12461 |
365 |
| CDS |
12556 |
12732 |
177 |
| CDS |
12804 |
13112 |
309 |
| CDS |
13190 |
13246 |
57 |
| intron |
11375 |
11445 |
71 |
| intron |
11756 |
11830 |
75 |
| intron |
12020 |
12096 |
77 |
| intron |
12462 |
12555 |
94 |
| intron |
12733 |
12803 |
71 |
| intron |
13113 |
13189 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001649344 |
camp/cgmp cyclic nucleotide phosphodiesterase [Aedes aegypti] gb|EAT44089.1| camp/cgmp cyclic nucleotide phosphodiesterase [Aedes aegypti] |
0.0 |
| InterPro |
IPR002073 |
3'5'-cyclic nucleotide phosphodiesterase, catalytic domain |
|
| InterPro |
IPR023174 |
3'5'-cyclic nucleotide phosphodiesterase, conserved site |
|
| InterPro |
IPR023088 |
3'5'-cyclic nucleotide phosphodiesterase |
|
| InterPro |
IPR003607 |
HD/PDEase domain |
|
| InterPro |
IPR003018 |
GAF domain |
|
| Gene Ontology(BP) |
GO:0007165 |
signal transduction |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Gene Ontology(MF) |
GO:0008081 |
phosphoric diester hydrolase activity |
|
| Gene Ontology(MF) |
GO:0004114 |
3',5'-cyclic-nucleotide phosphodiesterase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13492.1 |
GAF domain |
3.3e-09 |
| Pfam |
PF01590.21 |
GAF domain |
1.1e-16 |
| Pfam |
PF00233.14 |
3'5'-cyclic nucleotide phosphodiesterase |
9.6e-71 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS208448PA |
| T. castaneum |
TC005521 |
| H. sapiens |
ENSP00000416884 |
| H. sapiens |
ENSP00000351232 |
| P. vanderplanki |
Pv.13795 |
| P. humanus |
PHUM361080-PA |
| S. invicta |
SI2.2.0_00589 |
| H. sapiens |
ENSP00000374333 |
| H. sapiens |
ENSP00000390599 |
| D. plexippus |
DPOGS208447PA |
| C. quinquefasciatus |
CPIJ016085 |
| P. humanus |
PHUM497020-PA |
| H. melpomene |
HMEL013962-PA |
| M. musculus |
ENSMUSG00000053965 |
| P. vanderplanki |
Pv.12360 |
| A. mellifera |
GB18775-PA |
| H. melpomene |
HMEL017888-PA |
| H. sapiens |
ENSP00000425810 |
| B. mori |
BGIBMGA008851-TA |
| A. aegypti |
AAEL013747 |
| H. sapiens |
ENSP00000377957 |
| H. sapiens |
ENSP00000347046 |
| D. melanogaster |
FBgn0038237 |
| B. mori |
BGIBMGA000060-TA |
| C. quinquefasciatus |
CPIJ006988 |
| P. humanus |
PHUM066610-PA |
| A. gambiae |
AGAP008646 |
| T. castaneum |
TC011654 |
| S. invicta |
SI2.2.0_16524 |
| N. vitripennis |
NV50011-PA |
| A. aegypti |
AAEL017031 |
| A. aegypti |
AAEL004520 |
| H. sapiens |
ENSP00000264805 |
| H. sapiens |
ENSP00000286063 |
| D. plexippus |
DPOGS206191PA |
| A. mellifera |
GB19645-PA |
| C. quinquefasciatus |
CPIJ006990 |
| D. melanogaster |
FBgn0085370 |
| P. vanderplanki |
Pv.14388 |
| A. gambiae |
AGAP004119 |
| H. sapiens |
ENSP00000386539 |