MidgeBase gene description page [Pn.14823]
Outline
| Gene ID | Pn.14823 |
| Type | Protein coding gene |
| Scaffold | PnScaf26231 |
| Start | 526 |
| End | 3454 |
| Direction | + |
Sequence
Transcript: 963 (bp)
ATGGCAATTCTTGTGGAAGAAATAATTTGTAAAGCAGAGCCATCTGGACTTCCTATGGGCGATAACGGTGGGCTTGGAAAAGTGTTTCCAAAGCCCTTCACCGTCGTTAAATTTTTGATTTTTGAAATTTCTGTAGACAAGCGCGTCAAGGACTGGCTCTTTATGTCCAATCCGTTCAAGCCAATTACAATCATCGCAATTTATCTGCTGTTTGTTCTCAAATGGGGACCGAAAATTATGGAGAAGCGCCAGCCATACAAGCTAGACACGATAATAAAAATCTACAATCTGTTGCAAGTAGCAATTTGTGCGTACATAACCGTCGAAGCATACCGATATACATTCGCACGTGGCTACAACATTTTCTGCCAGCCTGTCGACTACTCCACGAACCCCGATGCCCTGCGAATCGCTCAGATTGGCCACTACTATTTCCTGACGAAGGTCTTTGATCTCTTGGACACGGTGTTTTTCGTGCTGAAGAAAAAGAACTCGCATGTGTCGTTTCTGCACGTCTACCATCATGCCGGAATGGTCGCTCTCACGTGGATAGGCACCAAATATTTCGTCGGCGGTCACTCAGTTTTCACCGGCTGGATCAACTCGCTGGTGCATGTGATCATGTACTTTTACTACTTCCTCACGACCGTCGACAACAAGTACAAGCAGAGCTTCTGGAAAAAGTACATCACTCAGCTGCAGATGATCCAATTCGGATTGATGGCTCTCCACTGGCTCTTCCTGAGACTGTCTCCTGACTGCGGGTTTCCAAAGTTCATTTCCTTCTTTATGCTTCCACAGAATGCGTTCATCTTCATTCTGTTCTACGATTTCTACAGAAAGGCCTATGGCAGCCAAAAGAATGCAAGTGCCGATAACACGAGTAAAGTGGAATTGAATAATAATGTTGACACAGGTGAACTTCCAAATGGAACGGAAGGCTTGAAGAAGGAAAAGGTCTAC
Protein: 321 (aa)
MAILVEEIICKAEPSGLPMGDNGGLGKVFPKPFTVVKFLIFEISVDKRVKDWLFMSNPFKPITIIAIYLLFVLKWGPKIMEKRQPYKLDTIIKIYNLLQVAICAYITVEAYRYTFARGYNIFCQPVDYSTNPDALRIAQIGHYYFLTKVFDLLDTVFFVLKKKNSHVSFLHVYHHAGMVALTWIGTKYFVGGHSVFTGWINSLVHVIMYFYYFLTTVDNKYKQSFWKKYITQLQMIQFGLMALHWLFLRLSPDCGFPKFISFFMLPQNAFIFILFYDFYRKAYGSQKNASADNTSKVELNNNVDTGELPNGTEGLKKEKVY
| Type | Start | End | Length |
| CDS |
526 |
562 |
37 |
| CDS |
1189 |
1254 |
66 |
| CDS |
2533 |
3134 |
602 |
| CDS |
3194 |
3451 |
258 |
| intron |
563 |
1188 |
626 |
| intron |
1255 |
2532 |
1278 |
| intron |
3135 |
3193 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_564957 |
AGAP007264-PA [Anopheles gambiae str. PEST] gb|EAL41836.3| AGAP007264-PA [Anopheles gambiae str. PEST] |
2e-80 |
| InterPro |
IPR002076 |
GNS1/SUR4 membrane protein |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01151.13 |
GNS1/SUR4 family |
6.6e-62 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC016279 |
| A. gambiae |
AGAP007264 |
| N. vitripennis |
NV17486-PA |
| A. mellifera |
GB13826-PA |
| P. vanderplanki |
Pv.13520 |
| D. plexippus |
DPOGS204195PA |
| B. mori |
BGIBMGA005156-TA |
| P. humanus |
PHUM381440-PA |
| D. plexippus |
DPOGS211376PA |
| A. aegypti |
AAEL008219 |
| H. melpomene |
HMEL009908-PA |
| A. aegypti |
AAEL015063 |
| P. humanus |
PHUM381330-PA |
| C. quinquefasciatus |
CPIJ002114 |