MidgeBase gene description page [Pn.14808]
Outline
| Gene ID | Pn.14808 |
| Type | Protein coding gene |
| Scaffold | PnScaf26148 |
| Start | 540 |
| End | 1824 |
| Direction | - |
Sequence
Transcript: 1080 (bp)
ATGCCAGCGTATTACGAGATGCTGGTATCACAAAGTCCGCCACTCTTCAGCCACAGCCCACCGACCGGGTTTCTCTCCGAATATGGTCCCAATCGATTCTACGAGTCGCCGCGCTTCTGTAGATCAGCCGCTGTCCTTTCACCGCTCTCGCAACGTCGCTTCCCGCCAACCAATCCACAAACGTCACTTTACCAATCACACTTGCAAAGCCTAACGCCCTATAAACCATGCATTGTACCTAAGCCACGCCGCTCATGCCTTATCGTTCGAACTGACTCGGAAAATATGAAAAATGACTCGGCCAGCGACAGCAGCGATGACAGTGACGACTGCGAGATTAAGCCACAGAAGCCAAAGAAGCGCGTCGTGTTCGCCGACGACAAGGGACTCGAATTGGAGCAAGTGAAAATCATGTCGGAGCCATCAACACAGCCGCCAACGTGGTCCTTGCAATTTTTGGCACACGTTACTCAGGGAATGATTTCGCCGGTGCCGCAGGAGCAATGGACCATTGATTTTAGACAGCCTGCATCAGATTATCTGGAGTTTAGACGCAAATTGGAAACTAATTTTGTGTCATTGGAAAATGTTATAATTAAAGAGTCAGAGTCGACTGTCGTCGGAACGGTGAAGGTGAAAAACTTGAATTTCCACAAGGAGGTCATCATTCGATCGACTTGGGATGCATGGAAATCAGAAACCGATACACTCTGTACATACTCAAAAATTGTCGGCGCCAGCGGAGCGTATGTGATTTACGATACATTTTCATTCAAACTCACCCTTCCACCACACTCTCGAACATTGGAATTTTGCGTATGCTATCGATCAGACGGAAAAGAGTTTTGGGATAATAACGGGGGTACAAATTACAAACTAACGAATCGTGTCTCGGCCCAGCAGCAAGAGAATGAGCTCGTGATAAGACTTAACAACACATCACTCAATGATCATAGCAAAGAAACTCAGGAGAATACACTGAGTAACTCGCACAGTGATCCAATTGATATGCCAAAACCACATTTCGGCTCTTGGTCCGAGTTCAGCACACGACATTCTGAATCGCCTCTACCGTATTGG
Protein: 360 (aa)
MPAYYEMLVSQSPPLFSHSPPTGFLSEYGPNRFYESPRFCRSAAVLSPLSQRRFPPTNPQTSLYQSHLQSLTPYKPCIVPKPRRSCLIVRTDSENMKNDSASDSSDDSDDCEIKPQKPKKRVVFADDKGLELEQVKIMSEPSTQPPTWSLQFLAHVTQGMISPVPQEQWTIDFRQPASDYLEFRRKLETNFVSLENVIIKESESTVVGTVKVKNLNFHKEVIIRSTWDAWKSETDTLCTYSKIVGASGAYVIYDTFSFKLTLPPHSRTLEFCVCYRSDGKEFWDNNGGTNYKLTNRVSAQQQENELVIRLNNTSLNDHSKETQENTLSNSHSDPIDMPKPHFGSWSEFSTRHSESPLPYW
| Type | Start | End | Length |
| CDS |
543 |
761 |
219 |
| CDS |
851 |
1160 |
310 |
| CDS |
1274 |
1824 |
551 |
| intron |
762 |
850 |
89 |
| intron |
1161 |
1273 |
113 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661490 |
protein phosphatase 1 binding protein [Aedes aegypti] gb|EAT36756.1| protein phosphatase 1 binding protein [Aedes aegypti] |
7e-85 |
| InterPro |
IPR005036 |
Putative phosphatase regulatory subunit |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF03423.8 |
Carbohydrate binding domain (family 25) |
8.3e-05 |
| Pfam |
PF03370.8 |
Putative phosphatase regulatory subunit |
2.9e-31 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM239050-PA |
| M. musculus |
ENSMUSG00000046794 |
| A. aegypti |
AAEL011191 |
| A. mellifera |
GB12349-PA |
| H. sapiens |
ENSP00000308318 |
| H. sapiens |
ENSP00000428642 |
| P. vanderplanki |
Pv.15258 |
| A. gambiae |
AGAP001520 |
| B. mori |
BGIBMGA009594-TA |
| N. vitripennis |
NV10937-PA |
| H. melpomene |
HMEL014225-PA |
| C. quinquefasciatus |
CPIJ013140 |
| S. invicta |
SI2.2.0_13050 |
| H. sapiens |
ENSP00000238994 |
| M. musculus |
ENSMUSG00000067279 |
| D. melanogaster |
FBgn0036428 |
| D. plexippus |
DPOGS215104PA |
| T. castaneum |
TC004080 |