MidgeBase gene description page [Pn.14457]
Outline
| Gene ID | Pn.14457 |
| Type | Protein coding gene |
| Scaffold | PnScaf24399 |
| Start | 62 |
| End | 2270 |
| Direction | - |
Sequence
Transcript: 879 (bp)
ATGTCAAATTTGAGACTTCGCAACATGAAGACGCTTTTAACTTTTTTTCTAATAGCAGGCAGTTTTTTGCTGGCTCAGGCTAAACCGAAAAATGTGGTGATCATAGTCGCCGACGACTTGGGCTTCAACGATGTGAGCTTTCGCGGCAGCAACGAGATTCCGACGCCAAATATTGATGCGCTGGCCTATGGCGGAGTCGTTTTAGATCGCTTTTACGCTGCACCAATGTGCACTCCGTCCAGGAGTGCCCTGATGACAGGAAAGTACCCAATTTCCAATGGAATGCAGCACTTTGTGATTCCGAACGACGAGCCCTGGGGCTTGCCACTCACTGACAAAATCATGCCCGAATACTTCAAGGACGCCGGATTTTCGACTCATTTAATAGGAAAGTGGCACCTGGGCTTCTACAAAAAGGAATACACGCCCACCTACCGTGGCTACGACACCTTCTTCGGCTACCACGGATCGCACATCGACTACTGGGACCACACTCAGTTCATCGTCCCGAAAAACTACTCGCGCGGCTACGACATTCGCAGGAACAAGGACATCGAGTGGCCGAAAGAGAAAATCTACGCAACGGACATGTTCACGAAAGAGGCCGTCACGCTCATCGAGGGCTTCGACAAGCGCAAGCCCTTCTTCATGATCGTCAATCACCTCGCGCCGCACGCTGGCAACGAGGATTTTCCCATGCAGGCGAAGGAGGAGGACCTGAAGCTGTTCGGCTACATCGAGAACCCGAAGCGAAGACAGCTGGCTGCGATGGTGAAGTCGCTTGACGACAGCGTCGGTGAAATTGTCGAGAGCTTGAGGAAGTCGGGACATCTGCAGGATACGATCATCGTTTTTTATTCCGATAACGGTTGGTATTTT
Protein: 293 (aa)
MSNLRLRNMKTLLTFFLIAGSFLLAQAKPKNVVIIVADDLGFNDVSFRGSNEIPTPNIDALAYGGVVLDRFYAAPMCTPSRSALMTGKYPISNGMQHFVIPNDEPWGLPLTDKIMPEYFKDAGFSTHLIGKWHLGFYKKEYTPTYRGYDTFFGYHGSHIDYWDHTQFIVPKNYSRGYDIRRNKDIEWPKEKIYATDMFTKEAVTLIEGFDKRKPFFMIVNHLAPHAGNEDFPMQAKEEDLKLFGYIENPKRRQLAAMVKSLDDSVGEIVESLRKSGHLQDTIIVFYSDNGWYF
| Type | Start | End | Length |
| CDS |
65 |
696 |
632 |
| CDS |
869 |
1112 |
244 |
| CDS |
2268 |
2270 |
3 |
| intron |
697 |
868 |
172 |
| intron |
1113 |
2267 |
1155 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001848165 |
arylsulfatase B [Culex quinquefasciatus] gb|EDS27759.1| arylsulfatase B [Culex quinquefasciatus] |
5e-93 |
| InterPro |
IPR017849 |
Alkaline phosphatase-like, alpha/beta/alpha |
|
| InterPro |
IPR024607 |
Sulfatase, conserved site |
|
| InterPro |
IPR017850 |
Alkaline-phosphatase-like, core domain |
|
| InterPro |
IPR000917 |
Sulfatase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0008484 |
sulfuric ester hydrolase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF01663.17 |
Type I phosphodiesterase / nucleotide pyrophosphatase |
1.2e-08 |
| Pfam |
PF02995.12 |
Protein of unknown function (DUF229) |
0.083 |
| Pfam |
PF00884.18 |
Sulfatase |
4.7e-57 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes